Factsheet for PGSC0003DMT400004090

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g110590.2.1	Tomato	mitochondrion	94.29	94.29
PGSC0003DMT400004089	Potato	cytosol	83.81	87.13
PGSC0003DMT400004186	Potato	mitochondrion	79.05	86.46
PGSC0003DMT400004187	Potato	mitochondrion	84.76	84.76
VIT_03s0038g00950.t01	Wine grape	mitochondrion	81.9	82.69
PGSC0003DMT400068694	Potato	mitochondrion	81.9	78.9
PGSC0003DMT400004167	Potato	mitochondrion	80.95	78.7
PGSC0003DMT400004165	Potato	mitochondrion	79.05	78.3
KRH39815	Soybean	mitochondrion	77.14	77.88
KRH24349	Soybean	mitochondrion	77.14	77.14
KRH51448	Soybean	cytosol	77.14	76.42
KRH60748	Soybean	cytosol	77.14	76.42
PGSC0003DMT400087067	Potato	mitochondrion	80.0	76.36
GSMUA_Achr1P02500_001	Banana	mitochondrion	71.43	75.76
GSMUA_Achr5P11350_001	Banana	mitochondrion	68.57	73.47
GSMUA_Achr11P...	Banana	mitochondrion	70.48	71.84
PGSC0003DMT400009665	Potato	mitochondrion	71.43	69.44
PGSC0003DMT400075050	Potato	cytosol	62.86	68.75
PGSC0003DMT400058186	Potato	cytosol	63.81	67.0
GSMUA_Achr3P11290_001	Banana	mitochondrion	63.81	65.69
GSMUA_Achr7P06520_001	Banana	mitochondrion	61.9	63.11
GSMUA_Achr1P06110_001	Banana	mitochondrion	58.1	61.62
PGSC0003DMT400009439	Potato	mitochondrion	59.05	61.39
Os02t0445600-01	Rice	cytosol, mitochondrion	55.24	59.79
GSMUA_Achr1P19860_001	Banana	mitochondrion	60.0	59.43
Os02t0445100-01	Rice	mitochondrion	47.62	52.08
Os06t0137400-00	Rice	mitochondrion	54.29	47.9
Zm00001d051802_P001	Maize	mitochondrion	52.38	47.83
KXG19242	Sorghum	mitochondrion	56.19	46.46
TraesCS4A01G375500.1	Wheat	mitochondrion	51.43	45.38
TraesCS7A01G077000.1	Wheat	mitochondrion	51.43	45.0
Zm00001d045423_P001	Maize	cytosol	53.33	44.8
TraesCS7D01G072600.1	Wheat	mitochondrion	51.43	43.2
Zm00001d004578_P001	Maize	plastid	46.67	39.52
PGSC0003DMT400067154	Potato	cytosol	33.33	33.33
Zm00001d012222_P001	Maize	cytosol	46.67	32.67
Zm00001d051962_P001	Maize	cytosol	49.52	32.5
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	50.48	29.44
PGSC0003DMT400055533	Potato	cytosol	33.33	28.93
PGSC0003DMT400080544	Potato	cytosol	31.43	27.05
Zm00001d008420_P001	Maize	cytosol	39.05	17.45
Zm00001d021237_P001	Maize	cytosol	40.0	14.79
Zm00001d033729_P001	Maize	nucleus	44.76	12.84
Zm00001d027753_P001	Maize	nucleus	39.05	9.69
Zm00001d053311_P001	Maize	nucleus	22.86	7.02

Protein Annotations

EnsemblPlants:PGSC0003DMT400004090	EnsemblPlantsGene:PGSC0003DMG400001615	EntrezGene:102600864	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	PGSC:PGSC0003DMG400001615	RefSeq:XP_006359616.1
UniParc:UPI0002963727	UniProt:M0ZMV7	MapMan:35.1	:	:	:

Description

SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001615]

Coordinates

chr1:-:86961431..86962089

Molecular Weight (calculated)

12134.8 Da

IEP (calculated)

7.386

GRAVY (calculated)

-0.153

Length

105 amino acids

Sequence
(BLAST)

001: MAIRKSNKLP QVVLLKQIMK KCSSLVKKND YDGEDRLPID VPKGHFAVYV GENRTRYIVP ISFLTHPEFQ CLLRCAEEEF GFDHDMGITI PCEEFIFQSL
101: TSVLR

Best Arabidopsis Sequence Match ( AT4G34760.1 )
(BLAST)

001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR

Arabidopsis Description

SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.