Factsheet for Solyc01g110590.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004090	Potato	mitochondrion	94.29	94.29
Solyc01g110580.2.1	Tomato	mitochondrion	78.1	85.42
VIT_03s0038g00950.t01	Wine grape	mitochondrion	83.81	84.62
Solyc01g110570.2.1	Tomato	mitochondrion	83.81	83.81
Solyc10g054720.1.1	Tomato	mitochondrion	80.95	77.98
KRH24349	Soybean	mitochondrion	77.14	77.14
KRH39815	Soybean	mitochondrion	76.19	76.92
Solyc01g110610.2.1	Tomato	cytosol, mitochondrion, nucleus	79.05	76.85
GSMUA_Achr1P02500_001	Banana	mitochondrion	72.38	76.77
KRH51448	Soybean	cytosol	77.14	76.42
KRH60748	Soybean	cytosol	77.14	76.42
Solyc01g110620.1.1	Tomato	mitochondrion	76.19	76.19
GSMUA_Achr5P11350_001	Banana	mitochondrion	69.52	74.49
GSMUA_Achr11P...	Banana	mitochondrion	72.38	73.79
Solyc04g081270.1.1	Tomato	mitochondrion	74.29	72.22
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	62.86	68.75
Solyc03g033590.1.1	Tomato	mitochondrion	63.81	67.68
GSMUA_Achr3P11290_001	Banana	mitochondrion	64.76	66.67
GSMUA_Achr7P06520_001	Banana	mitochondrion	63.81	65.05
GSMUA_Achr1P06110_001	Banana	mitochondrion	60.0	63.64
Solyc02g084010.1.1	Tomato	mitochondrion	59.05	60.78
GSMUA_Achr1P19860_001	Banana	mitochondrion	60.95	60.38
Os02t0445600-01	Rice	cytosol, mitochondrion	55.24	59.79
Os02t0445100-01	Rice	mitochondrion	47.62	52.08
Os06t0137400-00	Rice	mitochondrion	54.29	47.9
Zm00001d051802_P001	Maize	mitochondrion	52.38	47.83
KXG19242	Sorghum	mitochondrion	56.19	46.46
TraesCS4A01G375500.1	Wheat	mitochondrion	51.43	45.38
TraesCS7A01G077000.1	Wheat	mitochondrion	51.43	45.0
Zm00001d045423_P001	Maize	cytosol	53.33	44.8
TraesCS7D01G072600.1	Wheat	mitochondrion	51.43	43.2
Zm00001d004578_P001	Maize	plastid	46.67	39.52
Solyc06g065220.1.1	Tomato	cytosol	32.38	35.05
Zm00001d012222_P001	Maize	cytosol	46.67	32.67
Zm00001d051962_P001	Maize	cytosol	49.52	32.5
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	50.48	29.44
Solyc09g007970.1.1	Tomato	cytosol	32.38	28.1
Solyc10g086200.1.1	Tomato	cytosol	30.48	26.02
Zm00001d008420_P001	Maize	cytosol	39.05	17.45
Zm00001d021237_P001	Maize	cytosol	40.0	14.79
Zm00001d033729_P001	Maize	nucleus	44.76	12.84
Zm00001d027753_P001	Maize	nucleus	39.05	9.69
Zm00001d053311_P001	Maize	nucleus	22.86	7.02

Protein Annotations

EnsemblPlants:Solyc01g110590.2.1	EnsemblPlantsGene:Solyc01g110590.2	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	UniParc:UPI0002768FB8	UniProt:K4B3S2	MapMan:35.1

Description

No Description!

Coordinates

chr1:-:97240716..97241072

Molecular Weight (calculated)

12185.9 Da

IEP (calculated)

7.384

GRAVY (calculated)

-0.138

Length

105 amino acids

Sequence
(BLAST)

001: MAIRKSNKLP QVVLLKQIMK KCSSLIKKYD YDSEDRLPID VPKGHFAVYV GENRSRYIVP ISFLSHPEFQ CLLRCAEEEF GFDHDMGITI PCEEFVFQSL
101: TSVLR

Best Arabidopsis Sequence Match ( AT4G34760.1 )
(BLAST)

001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR

Arabidopsis Description

SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.