Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400004186 | Potato | mitochondrion | 96.88 | 96.88 |
| Solyc01g110590.2.1 | Tomato | mitochondrion | 85.42 | 78.1 |
| Solyc01g110570.2.1 | Tomato | mitochondrion | 78.12 | 71.43 |
| VIT_03s0038g00950.t01 | Wine grape | mitochondrion | 76.04 | 70.19 |
| GSMUA_Achr1P02500_001 | Banana | mitochondrion | 71.88 | 69.7 |
| GSMUA_Achr5P11350_001 | Banana | mitochondrion | 70.83 | 69.39 |
| Solyc10g054720.1.1 | Tomato | mitochondrion | 77.08 | 67.89 |
| KRH39815 | Soybean | mitochondrion | 72.92 | 67.31 |
| KRH51448 | Soybean | cytosol | 73.96 | 66.98 |
| KRH60748 | Soybean | cytosol | 73.96 | 66.98 |
| Solyc01g110620.1.1 | Tomato | mitochondrion | 72.92 | 66.67 |
| KRH24349 | Soybean | mitochondrion | 72.92 | 66.67 |
| Solyc01g110610.2.1 | Tomato | cytosol, mitochondrion, nucleus | 73.96 | 65.74 |
| Solyc02g062230.1.1 | Tomato | cytosol, mitochondrion | 65.62 | 65.62 |
| GSMUA_Achr11P... | Banana | mitochondrion | 69.79 | 65.05 |
| GSMUA_Achr3P11290_001 | Banana | mitochondrion | 67.71 | 63.73 |
| Solyc03g033590.1.1 | Tomato | mitochondrion | 65.62 | 63.64 |
| Solyc04g081270.1.1 | Tomato | mitochondrion | 70.83 | 62.96 |
| GSMUA_Achr1P06110_001 | Banana | mitochondrion | 62.5 | 60.61 |
| GSMUA_Achr7P06520_001 | Banana | mitochondrion | 63.54 | 59.22 |
| Solyc02g084010.1.1 | Tomato | mitochondrion | 62.5 | 58.82 |
| GSMUA_Achr1P19860_001 | Banana | mitochondrion | 63.54 | 57.55 |
| Os02t0445600-01 | Rice | cytosol, mitochondrion | 57.29 | 56.7 |
| Os02t0445100-01 | Rice | mitochondrion | 51.04 | 51.04 |
| Zm00001d051802_P001 | Maize | mitochondrion | 55.21 | 46.09 |
| Os06t0137400-00 | Rice | mitochondrion | 55.21 | 44.54 |
| Zm00001d045423_P001 | Maize | cytosol | 56.25 | 43.2 |
| TraesCS4A01G375500.1 | Wheat | mitochondrion | 53.12 | 42.86 |
| TraesCS7A01G077000.1 | Wheat | mitochondrion | 53.12 | 42.5 |
| KXG19242 | Sorghum | mitochondrion | 55.21 | 41.73 |
| TraesCS7D01G072600.1 | Wheat | mitochondrion | 53.12 | 40.8 |
| Zm00001d004578_P001 | Maize | plastid | 45.83 | 35.48 |
| Solyc06g065220.1.1 | Tomato | cytosol | 33.33 | 32.99 |
| Zm00001d012222_P001 | Maize | cytosol | 46.88 | 30.0 |
| Zm00001d051962_P001 | Maize | cytosol | 48.96 | 29.38 |
| Solyc09g007970.1.1 | Tomato | cytosol | 35.42 | 28.1 |
| HORVU7Hr1G017790.1 | Barley | extracellular, mitochondrion, plastid | 52.08 | 27.78 |
| Solyc10g086200.1.1 | Tomato | cytosol | 35.42 | 27.64 |
| Zm00001d008420_P001 | Maize | cytosol | 40.62 | 16.6 |
| Zm00001d021237_P001 | Maize | cytosol | 41.67 | 14.08 |
| Zm00001d033729_P001 | Maize | nucleus | 46.88 | 12.3 |
| Zm00001d027753_P001 | Maize | nucleus | 39.58 | 8.98 |
| Zm00001d053311_P001 | Maize | nucleus | 21.88 | 6.14 |
Protein Annotations
| EnsemblPlants:Solyc01g110580.2.1 | EnsemblPlantsGene:Solyc01g110580.2 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF2 | PFAM:PF02519 | UniParc:UPI0002768FB7 | UniProt:K4B3S1 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1:-:97234755..97235311
Molecular Weight (calculated)
11066.7 Da
IEP (calculated)
8.660
GRAVY (calculated)
0.058
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKLPQVVLL KQILKKCSSL SKKHEVHFPI DVPKGHFAVY VGKNRTRYIV PISFLTNPEF QCLLRCAEEE FGFNHDMGIT IPCEEFIFQS LTSILR
001: MSILKKSTKL AQTAMLRQIL KRCSSLGKKN GGGGYEEVDL PLDVPKGHFP VYVGHNRSRY IVPISFLTNL DFQCLLRRAE EEFGFDHDMG LTIPCDELFF
101: QDLTSMIR
101: QDLTSMIR
Arabidopsis Description
Putative auxin-induced protein [Source:UniProtKB/TrEMBL;Acc:Q9SI60]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.