Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051802_P001 | Maize | mitochondrion | 58.87 | 63.48 |
| Os06t0137400-00 | Rice | mitochondrion | 60.48 | 63.03 |
| Zm00001d045423_P001 | Maize | cytosol | 62.1 | 61.6 |
| KXG19242 | Sorghum | mitochondrion | 60.48 | 59.06 |
| TraesCS4A01G375500.1 | Wheat | mitochondrion | 50.0 | 52.1 |
| Zm00001d012222_P001 | Maize | cytosol | 62.9 | 52.0 |
| VIT_03s0038g00950.t01 | Wine grape | mitochondrion | 43.55 | 51.92 |
| TraesCS7A01G077000.1 | Wheat | mitochondrion | 50.0 | 51.67 |
| Bra008207.1-P | Field mustard | cytosol, mitochondrion | 39.52 | 51.58 |
| GSMUA_Achr7P06520_001 | Banana | mitochondrion | 42.74 | 51.46 |
| TraesCS7D01G072600.1 | Wheat | mitochondrion | 50.81 | 50.4 |
| VIT_18s0001g13980.t01 | Wine grape | mitochondrion | 41.94 | 50.0 |
| GSMUA_Achr5P11350_001 | Banana | mitochondrion | 39.52 | 50.0 |
| GSMUA_Achr3P11290_001 | Banana | mitochondrion | 41.13 | 50.0 |
| GSMUA_Achr1P19860_001 | Banana | mitochondrion | 42.74 | 50.0 |
| GSMUA_Achr11P... | Banana | mitochondrion | 41.13 | 49.51 |
| GSMUA_Achr1P02500_001 | Banana | mitochondrion | 39.52 | 49.49 |
| Zm00001d051962_P001 | Maize | cytosol | 62.9 | 48.75 |
| CDY13560 | Canola | mitochondrion | 41.94 | 48.15 |
| CDX85905 | Canola | mitochondrion | 41.94 | 48.15 |
| CDX68122 | Canola | mitochondrion | 41.94 | 48.15 |
| Bra003746.1-P | Field mustard | mitochondrion | 41.94 | 48.15 |
| KRH51448 | Soybean | cytosol | 41.13 | 48.11 |
| KRH60748 | Soybean | cytosol | 41.13 | 48.11 |
| Solyc01g110570.2.1 | Tomato | mitochondrion | 40.32 | 47.62 |
| PGSC0003DMT400004187 | Potato | mitochondrion | 40.32 | 47.62 |
| CDY39041 | Canola | mitochondrion | 41.13 | 47.22 |
| Solyc04g081270.1.1 | Tomato | mitochondrion | 41.13 | 47.22 |
| AT1G75580.1 | Thale cress | mitochondrion | 41.13 | 47.22 |
| PGSC0003DMT400009665 | Potato | mitochondrion | 41.13 | 47.22 |
| KRH51719 | Soybean | mitochondrion | 37.9 | 47.0 |
| KRH61056 | Soybean | mitochondrion | 37.9 | 47.0 |
| Solyc10g054720.1.1 | Tomato | mitochondrion | 41.13 | 46.79 |
| KRH24349 | Soybean | mitochondrion | 39.52 | 46.67 |
| PGSC0003DMT400004090 | Potato | mitochondrion | 39.52 | 46.67 |
| Solyc01g110590.2.1 | Tomato | mitochondrion | 39.52 | 46.67 |
| PGSC0003DMT400004089 | Potato | cytosol | 37.9 | 46.53 |
| GSMUA_Achr1P06110_001 | Banana | mitochondrion | 37.1 | 46.46 |
| Bra015832.1-P | Field mustard | mitochondrion | 40.32 | 46.3 |
| PGSC0003DMT400004167 | Potato | mitochondrion | 40.32 | 46.3 |
| CDY47511 | Canola | mitochondrion | 40.32 | 46.3 |
| PGSC0003DMT400068694 | Potato | mitochondrion | 40.32 | 45.87 |
| Solyc01g110580.2.1 | Tomato | mitochondrion | 35.48 | 45.83 |
| PGSC0003DMT400004186 | Potato | mitochondrion | 35.48 | 45.83 |
| Solyc01g110610.2.1 | Tomato | cytosol, mitochondrion, nucleus | 39.52 | 45.37 |
| CDX73181 | Canola | mitochondrion | 39.52 | 45.37 |
| KRH39815 | Soybean | mitochondrion | 37.9 | 45.19 |
| PGSC0003DMT400004165 | Potato | mitochondrion | 37.1 | 43.4 |
| Solyc01g110620.1.1 | Tomato | mitochondrion | 36.29 | 42.86 |
| AT1G19830.1 | Thale cress | mitochondrion | 38.71 | 41.03 |
| CDY44482 | Canola | mitochondrion | 37.1 | 40.71 |
| CDY55152 | Canola | cytosol, mitochondrion | 36.29 | 39.82 |
| Bra025770.1-P | Field mustard | cytosol, mitochondrion | 35.48 | 38.94 |
| PGSC0003DMT400087067 | Potato | mitochondrion | 33.87 | 38.18 |
| CDY29398 | Canola | cytosol, mitochondrion | 34.68 | 38.05 |
| HORVU7Hr1G017790.1 | Barley | extracellular, mitochondrion, plastid | 50.0 | 34.44 |
| Zm00001d003018_P001 | Maize | mitochondrion | 33.87 | 33.07 |
| Zm00001d008420_P001 | Maize | cytosol | 50.0 | 26.38 |
| Zm00001d033729_P001 | Maize | nucleus | 68.55 | 23.22 |
| Zm00001d021237_P001 | Maize | cytosol | 48.39 | 21.13 |
| Zm00001d027753_P001 | Maize | nucleus | 54.03 | 15.84 |
| Zm00001d053311_P001 | Maize | nucleus | 27.42 | 9.94 |
Protein Annotations
| EnsemblPlants:Zm00001d004578_P001 | EnsemblPlants:Zm00001d004578_T001 | EnsemblPlantsGene:Zm00001d004578 | EntrezGene:103643117 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF35 | PFAM:PF02519 | ProteinID:ONM19232.1 |
| SEG:seg | UniParc:UPI0004DEC3DF | UniProt:A0A1D6EGD6 | MapMan:35.2 | : | : |
Description
SAUR-like auxin-responsive protein family
Coordinates
chr2:+:119261511..119268416
Molecular Weight (calculated)
13618.2 Da
IEP (calculated)
8.324
GRAVY (calculated)
-0.164
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAPSSRAR AQPLASAFSS RSFPGGCSRF PYPRPTEVPP YAWEGEEEAT GLPSDVSRGH FAVYVGERRC RFVVPIALLD RPEFRYLLWR AKEEFGFAGA
101: GGTLVLPCEE VAFRSLTSAL ACTR
101: GGTLVLPCEE VAFRSLTSAL ACTR
001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR
101: RSLTSMLR
Arabidopsis Description
At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.