CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55152	Canola	cytosol, mitochondrion	79.65	79.65
AT1G19830.1	Thale cress	mitochondrion	82.3	79.49
CDY29398	Canola	cytosol, mitochondrion	77.88	77.88
CDX68122	Canola	mitochondrion	73.45	76.85
CDY13560	Canola	mitochondrion	73.45	76.85
CDX85905	Canola	mitochondrion	72.57	75.93
CDY39041	Canola	mitochondrion	72.57	75.93
CDY47511	Canola	mitochondrion	72.57	75.93
CDX73181	Canola	mitochondrion	71.68	75.0
VIT_18s0001g13980.t01	Wine grape	mitochondrion	69.03	75.0
KRH61056	Soybean	mitochondrion	64.6	73.0
KRH51719	Soybean	mitochondrion	64.6	73.0
GSMUA_Achr1P02500_001	Banana	mitochondrion	63.72	72.73
GSMUA_Achr5P11350_001	Banana	mitochondrion	61.95	71.43
CDY63257	Canola	mitochondrion	67.26	71.03
CDX76303	Canola	mitochondrion	67.26	71.03
CDY70461	Canola	mitochondrion	67.26	71.03
CDY41947	Canola	mitochondrion	65.49	70.48
CDX82007	Canola	mitochondrion	64.6	70.19
CDX72733	Canola	mitochondrion	64.6	70.19
CDY22408	Canola	mitochondrion	64.6	70.19
CDY13831	Canola	mitochondrion	64.6	70.19
CDY42589	Canola	mitochondrion	64.6	69.52
CDX75460	Canola	mitochondrion	65.49	69.16
CDX69086	Canola	mitochondrion	64.6	68.22
GSMUA_Achr11P...	Banana	mitochondrion	61.95	67.96
Solyc04g081270.1.1	Tomato	mitochondrion	64.6	67.59
CDX72500	Canola	mitochondrion	63.72	67.29
PGSC0003DMT400009665	Potato	mitochondrion	62.83	65.74
CDY47053	Canola	mitochondrion, plastid	57.52	65.66
CDY45331	Canola	mitochondrion	61.95	65.42
CDY02251	Canola	mitochondrion	61.95	64.81
CDX89731	Canola	mitochondrion	61.95	64.81
GSMUA_Achr3P11290_001	Banana	mitochondrion	57.52	63.73
CDX72576	Canola	mitochondrion	55.75	63.64
CDY08909	Canola	mitochondrion	58.41	63.46
CDY24829	Canola	mitochondrion	58.41	63.46
GSMUA_Achr1P19860_001	Banana	mitochondrion	59.29	63.21
CDY38169	Canola	cytosol, mitochondrion, nucleus	59.29	62.04
CDY54551	Canola	cytosol, mitochondrion, nucleus	59.29	62.04
CDY68553	Canola	cytosol, mitochondrion, nucleus	59.29	62.04
CDY30334	Canola	cytosol, mitochondrion, nucleus	59.29	62.04
CDX69199	Canola	mitochondrion, plastid	56.64	61.54
CDX75553	Canola	mitochondrion, plastid	56.64	61.54
GSMUA_Achr7P06520_001	Banana	mitochondrion	55.75	61.16
GSMUA_Achr1P06110_001	Banana	mitochondrion	52.21	59.6
CDY18596	Canola	cytosol, mitochondrion, nucleus	50.44	57.0
CDX81404	Canola	cytosol, mitochondrion, nucleus	49.56	56.0
Os02t0445600-01	Rice	cytosol, mitochondrion	47.79	55.67
Os02t0445100-01	Rice	mitochondrion	44.25	52.08
Zm00001d051802_P001	Maize	mitochondrion	49.56	48.7
Os06t0137400-00	Rice	mitochondrion	49.56	47.06
TraesCS4A01G375500.1	Wheat	mitochondrion	48.67	46.22
TraesCS7A01G077000.1	Wheat	mitochondrion	48.67	45.83
KXG19242	Sorghum	mitochondrion	51.33	45.67
Zm00001d045423_P001	Maize	cytosol	50.44	45.6
CDX73741	Canola	cytosol, mitochondrion, nucleus	40.71	44.66
TraesCS7D01G072600.1	Wheat	mitochondrion	48.67	44.0
Zm00001d004578_P001	Maize	plastid	40.71	37.1
CDY20904	Canola	cytosol, extracellular	41.59	37.01
CDX90724	Canola	cytosol	28.32	32.65
CDY05061	Canola	cytosol	28.32	32.65
CDY18466	Canola	cytosol, mitochondrion	33.63	32.2
Zm00001d012222_P001	Maize	cytosol	41.59	31.33
CDX79712	Canola	cytosol	33.63	30.65
CDY46750	Canola	cytosol	33.63	30.65
Zm00001d051962_P001	Maize	cytosol	43.36	30.62
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	47.79	30.0
CDX70314	Canola	mitochondrion	27.43	28.97
CDX74993	Canola	cytosol	31.86	28.8
CDX91329	Canola	cytosol	31.86	28.8
CDY10388	Canola	mitochondrion	26.55	28.04
CDY44355	Canola	mitochondrion	26.55	27.03
CDY62892	Canola	mitochondrion	26.55	27.03
CDX78160	Canola	cytosol	29.2	25.38
CDX73568	Canola	cytosol	29.2	25.38
CDX67565	Canola	cytosol	29.2	25.19
CDY13307	Canola	cytosol	29.2	25.19
Zm00001d008420_P001	Maize	cytosol	35.4	17.02
Zm00001d021237_P001	Maize	cytosol	35.4	14.08
Zm00001d033729_P001	Maize	nucleus	41.59	12.84
Zm00001d027753_P001	Maize	nucleus	34.51	9.22
Zm00001d053311_P001	Maize	nucleus	20.35	6.73

Protein Annotations

EnsemblPlants:CDY44482	EnsemblPlantsGene:GSBRNA2T00080222001	GO:A0A078I367	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:CDY44482	ProteinID:CDY44482.1
SEG:seg	UniParc:UPI0004EE5FEA	UniProt:A0A078I367	MapMan:35.1	:	:

Description

BnaC07g15580DBnaC07g15580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I367]

Coordinates

chrLK032591:-:79511..79852

Molecular Weight (calculated)

13028.9 Da

IEP (calculated)

5.752

GRAVY (calculated)

-0.136

Length

113 amino acids

Sequence
(BLAST)

001: MAIKIRTTKL TQTTIIKQIL KRCSSLGKKQ TNEYKDEQEL DGEFLPLDVP KGHFVVYVGK TRVRYVLPIS FLTRPEFQLL LQQAEEEFGF DHDMGLTIPC
101: EEVAFDSLVV SMF

Best Arabidopsis Sequence Match ( AT1G19830.1 )
(BLAST)

001: MAIINRSKLT QTTMIKQILK RCSSLGKKQS SEYNDTHEHD GDSLPLDVPK GHFVVYVGGN RVRYVLPISF LTRPEFQLLL QQAEEEFGFD HNMGLTIPCE
101: EVAFKSLITS MLQPTYI

Arabidopsis Description

At1g19830 [Source:UniProtKB/TrEMBL;Acc:Q9FXI0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.