Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036830.1-P | Field mustard | cytosol, mitochondrion, nucleus | 98.06 | 96.19 |
| AT3G51200.1 | Thale cress | nucleus | 62.14 | 60.38 |
| CDY18596 | Canola | cytosol, mitochondrion, nucleus | 54.37 | 56.0 |
| CDX81404 | Canola | cytosol, mitochondrion, nucleus | 53.4 | 55.0 |
| CDY47053 | Canola | mitochondrion, plastid | 49.51 | 51.52 |
| CDX75460 | Canola | mitochondrion | 52.43 | 50.47 |
| CDX69199 | Canola | mitochondrion, plastid | 50.49 | 50.0 |
| CDX75553 | Canola | mitochondrion, plastid | 50.49 | 50.0 |
| CDX69086 | Canola | mitochondrion | 51.46 | 49.53 |
| CDY45331 | Canola | mitochondrion | 51.46 | 49.53 |
| CDX72576 | Canola | mitochondrion | 47.57 | 49.49 |
| CDY24829 | Canola | mitochondrion | 49.51 | 49.04 |
| CDY08909 | Canola | mitochondrion | 49.51 | 49.04 |
| CDY70461 | Canola | mitochondrion | 50.49 | 48.6 |
| CDY63257 | Canola | mitochondrion | 50.49 | 48.6 |
| CDX76303 | Canola | mitochondrion | 50.49 | 48.6 |
| CDY42589 | Canola | mitochondrion | 49.51 | 48.57 |
| CDY41947 | Canola | mitochondrion | 49.51 | 48.57 |
| CDX72733 | Canola | mitochondrion | 48.54 | 48.08 |
| CDY22408 | Canola | mitochondrion | 48.54 | 48.08 |
| CDX72500 | Canola | mitochondrion | 49.51 | 47.66 |
| CDX68122 | Canola | mitochondrion | 49.51 | 47.22 |
| CDX85905 | Canola | mitochondrion | 49.51 | 47.22 |
| CDX73181 | Canola | mitochondrion | 48.54 | 46.3 |
| CDY47511 | Canola | mitochondrion | 48.54 | 46.3 |
| CDY13831 | Canola | mitochondrion | 46.6 | 46.15 |
| CDX82007 | Canola | mitochondrion | 46.6 | 46.15 |
| CDX89731 | Canola | mitochondrion | 46.6 | 44.44 |
| CDY39041 | Canola | mitochondrion | 46.6 | 44.44 |
| CDY02251 | Canola | mitochondrion | 46.6 | 44.44 |
| CDY13560 | Canola | mitochondrion | 46.6 | 44.44 |
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 45.63 | 43.52 |
| CDY38169 | Canola | cytosol, mitochondrion, nucleus | 44.66 | 42.59 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 43.69 | 41.67 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 43.69 | 41.67 |
| CDY44482 | Canola | mitochondrion | 44.66 | 40.71 |
| CDY55152 | Canola | cytosol, mitochondrion | 41.75 | 38.05 |
| CDY29398 | Canola | cytosol, mitochondrion | 39.81 | 36.28 |
| CDX91329 | Canola | cytosol | 31.07 | 25.6 |
| CDX74993 | Canola | cytosol | 31.07 | 25.6 |
| CDX90724 | Canola | cytosol | 24.27 | 25.51 |
| CDY05061 | Canola | cytosol | 24.27 | 25.51 |
| CDY18466 | Canola | cytosol, mitochondrion | 29.13 | 25.42 |
| CDX70314 | Canola | mitochondrion | 26.21 | 25.23 |
| CDY20904 | Canola | cytosol, extracellular | 31.07 | 25.2 |
| CDY46750 | Canola | cytosol | 30.1 | 25.0 |
| CDX79712 | Canola | cytosol | 30.1 | 25.0 |
| CDY44355 | Canola | mitochondrion | 26.21 | 24.32 |
| CDY62892 | Canola | mitochondrion | 26.21 | 24.32 |
| CDY10388 | Canola | mitochondrion | 25.24 | 24.3 |
| CDX67565 | Canola | cytosol | 29.13 | 22.9 |
| CDY13307 | Canola | cytosol | 29.13 | 22.9 |
| CDX73568 | Canola | cytosol | 28.16 | 22.31 |
| CDX78160 | Canola | cytosol | 28.16 | 22.31 |
Protein Annotations
| EnsemblPlants:CDX73741 | EnsemblPlantsGene:GSBRNA2T00109346001 | GO:A0A078C9J0 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF35 | PFAM:PF02519 | ProteinID:CDX73741 | ProteinID:CDX73741.1 |
| UniParc:UPI0004EE6C26 | MapMan:35.1 | : | : | : | : |
Description
BnaC08g22620D
Coordinates
chrLK031799:+:2427263..2427574
Molecular Weight (calculated)
11736.6 Da
IEP (calculated)
10.651
GRAVY (calculated)
-0.187
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIKIASKAQ TEKVAAPLKQ MLKRCSSLLK KGKEEVTRKG HFAVYVGQSR SRHVIPITLL NHPIFQMMLH EAEKEFGFRQ ERGITIPFDQ NIFLLDIISN
101: LTS
101: LTS
001: MEIKEASKTQ RERRGASSLK QMLMKRCSSF VKKSNEEDVP KKGYFAVYVG HFRDRHVIPI TSLNHPTFKM MLQKSEEEFG FRQESGLTIP CDQNTFLTLL
101: DSITSY
101: DSITSY
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9SD26]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.