Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005223.1-P | Field mustard | cytosol | 95.2 | 95.2 |
| CDX91329 | Canola | cytosol | 91.2 | 91.2 |
| CDY46750 | Canola | cytosol | 84.0 | 84.68 |
| CDY18466 | Canola | cytosol, mitochondrion | 79.2 | 83.9 |
| CDX79712 | Canola | cytosol | 83.2 | 83.87 |
| AT2G37030.1 | Thale cress | cytosol | 80.0 | 80.65 |
| CDX78160 | Canola | cytosol | 67.2 | 64.62 |
| CDX73568 | Canola | cytosol | 67.2 | 64.62 |
| CDX67565 | Canola | cytosol | 64.8 | 61.83 |
| CDY13307 | Canola | cytosol | 64.0 | 61.07 |
| Solyc09g007970.1.1 | Tomato | cytosol | 53.6 | 55.37 |
| PGSC0003DMT400055533 | Potato | cytosol | 53.6 | 55.37 |
| KRH19939 | Soybean | cytosol | 54.4 | 55.28 |
| KRH32539 | Soybean | cytosol | 54.4 | 54.4 |
| CDX70314 | Canola | mitochondrion | 46.4 | 54.21 |
| VIT_08s0040g01670.t01 | Wine grape | mitochondrion | 52.8 | 53.23 |
| KRH67711 | Soybean | cytosol | 44.8 | 52.83 |
| CDY10388 | Canola | mitochondrion | 44.8 | 52.34 |
| Solyc10g086200.1.1 | Tomato | cytosol | 50.4 | 51.22 |
| PGSC0003DMT400080544 | Potato | cytosol | 48.8 | 50.0 |
| KRG95997 | Soybean | mitochondrion | 49.6 | 49.6 |
| CDY62892 | Canola | mitochondrion | 42.4 | 47.75 |
| CDY44355 | Canola | mitochondrion | 41.6 | 46.85 |
| OQU81983 | Sorghum | mitochondrion | 37.6 | 37.3 |
| CDX72733 | Canola | mitochondrion | 30.4 | 36.54 |
| CDY22408 | Canola | mitochondrion | 30.4 | 36.54 |
| CDX68122 | Canola | mitochondrion | 31.2 | 36.11 |
| CDY47511 | Canola | mitochondrion | 31.2 | 36.11 |
| CDX85905 | Canola | mitochondrion | 31.2 | 36.11 |
| CDX73181 | Canola | mitochondrion | 31.2 | 36.11 |
| CDX82007 | Canola | mitochondrion | 29.6 | 35.58 |
| CDY13831 | Canola | mitochondrion | 29.6 | 35.58 |
| Zm00001d003018_P001 | Maize | mitochondrion | 36.0 | 35.43 |
| CDY41947 | Canola | mitochondrion | 29.6 | 35.24 |
| CDY13560 | Canola | mitochondrion | 30.4 | 35.19 |
| CDY39041 | Canola | mitochondrion | 30.4 | 35.19 |
| CDY18596 | Canola | cytosol, mitochondrion, nucleus | 28.0 | 35.0 |
| Os04t0517900-01 | Rice | mitochondrion | 36.0 | 34.88 |
| CDX75460 | Canola | mitochondrion | 29.6 | 34.58 |
| CDY42589 | Canola | mitochondrion | 28.8 | 34.29 |
| CDX81404 | Canola | cytosol, mitochondrion, nucleus | 27.2 | 34.0 |
| CDX69086 | Canola | mitochondrion | 28.8 | 33.64 |
| CDY55152 | Canola | cytosol, mitochondrion | 29.6 | 32.74 |
| CDX76303 | Canola | mitochondrion | 28.0 | 32.71 |
| CDY45331 | Canola | mitochondrion | 28.0 | 32.71 |
| CDX72500 | Canola | mitochondrion | 28.0 | 32.71 |
| CDY70461 | Canola | mitochondrion | 28.0 | 32.71 |
| CDY63257 | Canola | mitochondrion | 28.0 | 32.71 |
| CDY47053 | Canola | mitochondrion, plastid | 25.6 | 32.32 |
| CDX72576 | Canola | mitochondrion | 25.6 | 32.32 |
| CDY44482 | Canola | mitochondrion | 28.8 | 31.86 |
| CDY29398 | Canola | cytosol, mitochondrion | 28.8 | 31.86 |
| CDX69199 | Canola | mitochondrion, plastid | 26.4 | 31.73 |
| CDX75553 | Canola | mitochondrion, plastid | 26.4 | 31.73 |
| CDX73741 | Canola | cytosol, mitochondrion, nucleus | 25.6 | 31.07 |
| CDY24829 | Canola | mitochondrion | 25.6 | 30.77 |
| CDY08909 | Canola | mitochondrion | 25.6 | 30.77 |
| CDX89731 | Canola | mitochondrion | 26.4 | 30.56 |
| CDY02251 | Canola | mitochondrion | 25.6 | 29.63 |
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 24.8 | 28.7 |
| TraesCS2A01G381300.1 | Wheat | plastid | 34.4 | 27.92 |
| TraesCS2B01G398600.1 | Wheat | cytosol, plastid | 33.6 | 27.81 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 24.0 | 27.78 |
| CDY38169 | Canola | cytosol, mitochondrion, nucleus | 24.0 | 27.78 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 24.0 | 27.78 |
| HORVU2Hr1G089400.1 | Barley | plastid | 34.4 | 27.39 |
| CDX90724 | Canola | cytosol | 20.8 | 26.53 |
| CDY05061 | Canola | cytosol | 20.8 | 26.53 |
| TraesCS2D01G377800.1 | Wheat | plastid | 32.8 | 26.45 |
| CDY20904 | Canola | cytosol, extracellular | 23.2 | 22.83 |
| GSMUA_Achr1P09150_001 | Banana | nucleus | 34.4 | 22.51 |
Protein Annotations
| EnsemblPlants:CDX74993 | EnsemblPlantsGene:GSBRNA2T00117013001 | GO:A0A078CIX0 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF45 | PFAM:PF02519 | ProteinID:CDX74993 | ProteinID:CDX74993.1 |
| SEG:seg | UniParc:UPI0004EDF20A | MapMan:35.2 | : | : | : |
Description
BnaA05g07390D
Coordinates
chrLK031802:-:1825940..1826422
Molecular Weight (calculated)
13920.2 Da
IEP (calculated)
8.570
GRAVY (calculated)
0.028
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSKLIKSCE KKLKVMTSKV TTPCTFCETC CERICLAFKK EAQTIPKDVP KGHLVVYVGE ESRRFVIKIT LLTHPLFKAL LDQAQDAYGF SSADSRLWIP
101: CDVSTFLNVA RCAGAPQDQG NCICI
101: CDVSTFLNVA RCAGAPQDQG NCICI
001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI
101: NESTFLDVVR CAGAPQHQNN CICI
Arabidopsis Description
Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.