CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39041	Canola	mitochondrion	99.07	99.07
AT1G75580.1	Thale cress	mitochondrion	93.52	93.52
CDY47511	Canola	mitochondrion	92.59	92.59
CDX73181	Canola	mitochondrion	91.67	91.67
CDX68122	Canola	mitochondrion	90.74	90.74
CDX85905	Canola	mitochondrion	89.81	89.81
VIT_18s0001g13980.t01	Wine grape	mitochondrion	77.78	80.77
GSMUA_Achr5P11350_001	Banana	mitochondrion	72.22	79.59
KRH51719	Soybean	mitochondrion	73.15	79.0
KRH61056	Soybean	mitochondrion	73.15	79.0
CDX72733	Canola	mitochondrion	75.93	78.85
CDY22408	Canola	mitochondrion	75.93	78.85
CDY13831	Canola	mitochondrion	75.93	78.85
CDX82007	Canola	mitochondrion	75.93	78.85
CDY41947	Canola	mitochondrion	75.93	78.1
GSMUA_Achr1P02500_001	Banana	mitochondrion	71.3	77.78
CDY42589	Canola	mitochondrion	75.0	77.14
CDX75460	Canola	mitochondrion	75.0	75.7
CDY70461	Canola	mitochondrion	74.07	74.77
CDY63257	Canola	mitochondrion	74.07	74.77
CDX69086	Canola	mitochondrion	74.07	74.77
CDX76303	Canola	mitochondrion	74.07	74.77
GSMUA_Achr11P...	Banana	mitochondrion	70.37	73.79
GSMUA_Achr3P11290_001	Banana	mitochondrion	69.44	73.53
CDY44482	Canola	mitochondrion	76.85	73.45
Solyc04g081270.1.1	Tomato	mitochondrion	73.15	73.15
CDY45331	Canola	mitochondrion	72.22	72.9
CDX72500	Canola	mitochondrion	71.3	71.96
CDY55152	Canola	cytosol, mitochondrion	75.0	71.68
CDY29398	Canola	cytosol, mitochondrion	73.15	69.91
GSMUA_Achr7P06520_001	Banana	mitochondrion	66.67	69.9
GSMUA_Achr1P06110_001	Banana	mitochondrion	63.89	69.7
CDY47053	Canola	mitochondrion, plastid	63.89	69.7
PGSC0003DMT400009665	Potato	mitochondrion	69.44	69.44
CDY08909	Canola	mitochondrion	65.74	68.27
CDY24829	Canola	mitochondrion	65.74	68.27
GSMUA_Achr1P19860_001	Banana	mitochondrion	66.67	67.92
CDX72576	Canola	mitochondrion	62.04	67.68
CDX89731	Canola	mitochondrion	66.67	66.67
CDX69199	Canola	mitochondrion, plastid	63.89	66.35
CDX75553	Canola	mitochondrion, plastid	63.89	66.35
CDY02251	Canola	mitochondrion	65.74	65.74
CDY38169	Canola	cytosol, mitochondrion, nucleus	63.89	63.89
CDY68553	Canola	cytosol, mitochondrion, nucleus	63.89	63.89
CDY54551	Canola	cytosol, mitochondrion, nucleus	62.04	62.04
CDY30334	Canola	cytosol, mitochondrion, nucleus	62.04	62.04
Os02t0445100-01	Rice	mitochondrion	51.85	58.33
CDY18596	Canola	cytosol, mitochondrion, nucleus	53.7	58.0
Zm00001d051802_P001	Maize	mitochondrion	61.11	57.39
CDX81404	Canola	cytosol, mitochondrion, nucleus	52.78	57.0
Os06t0137400-00	Rice	mitochondrion	60.19	54.62
Os02t0445600-01	Rice	cytosol, mitochondrion	48.15	53.61
TraesCS4A01G375500.1	Wheat	mitochondrion	57.41	52.1
Zm00001d045423_P001	Maize	cytosol	60.19	52.0
TraesCS7A01G077000.1	Wheat	mitochondrion	57.41	51.67
KXG19242	Sorghum	mitochondrion	60.19	51.18
TraesCS7D01G072600.1	Wheat	mitochondrion	57.41	49.6
CDX73741	Canola	cytosol, mitochondrion, nucleus	44.44	46.6
Zm00001d004578_P001	Maize	plastid	48.15	41.94
Zm00001d012222_P001	Maize	cytosol	52.78	38.0
CDX90724	Canola	cytosol	34.26	37.76
CDY05061	Canola	cytosol	34.26	37.76
CDY20904	Canola	cytosol, extracellular	43.52	37.01
Zm00001d051962_P001	Maize	cytosol	52.78	35.62
CDX70314	Canola	mitochondrion	35.19	35.51
CDY10388	Canola	mitochondrion	35.19	35.51
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	56.48	33.89
CDY18466	Canola	cytosol, mitochondrion	35.19	32.2
CDY62892	Canola	mitochondrion	32.41	31.53
CDY44355	Canola	mitochondrion	32.41	31.53
CDY46750	Canola	cytosol	35.19	30.65
CDX79712	Canola	cytosol	35.19	30.65
CDX74993	Canola	cytosol	35.19	30.4
CDX91329	Canola	cytosol	35.19	30.4
CDX73568	Canola	cytosol	29.63	24.62
CDX78160	Canola	cytosol	29.63	24.62
CDX67565	Canola	cytosol	29.63	24.43
CDY13307	Canola	cytosol	29.63	24.43
Zm00001d008420_P001	Maize	cytosol	39.81	18.3
Zm00001d021237_P001	Maize	cytosol	38.89	14.79
Zm00001d033729_P001	Maize	nucleus	48.15	14.21
Zm00001d027753_P001	Maize	nucleus	40.74	10.4
Zm00001d053311_P001	Maize	nucleus	22.22	7.02

Protein Annotations

EnsemblPlants:CDY13560	EnsemblPlantsGene:GSBRNA2T00077926001	GO:A0A078FGL1	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:CDY13560	ProteinID:CDY13560.1
SEG:seg	UniParc:UPI0004EF339E	UniProt:A0A078FGL1	MapMan:35.1	:	:

Description

BnaC02g23710DBnaC02g23710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGL1]

Coordinates

chrLK032036:-:415258..415690

Molecular Weight (calculated)

12427.2 Da

IEP (calculated)

8.219

GRAVY (calculated)

-0.297

Length

108 amino acids

Sequence
(BLAST)

001: MAMKKTSKLT QTAMIKQILK RCSSLGKRQS NVYSEDENGQ PLDVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFEHDMG LTIPCEEVVF
101: RSLTSMLR

Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR

Arabidopsis Description

At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.