CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003746.1-P	Field mustard	mitochondrion	99.07	99.07
CDX68122	Canola	mitochondrion	99.07	99.07
CDY47511	Canola	mitochondrion	93.52	93.52
CDX73181	Canola	mitochondrion	92.59	92.59
AT1G75580.1	Thale cress	mitochondrion	91.67	91.67
CDY13560	Canola	mitochondrion	89.81	89.81
CDY39041	Canola	mitochondrion	88.89	88.89
VIT_18s0001g13980.t01	Wine grape	mitochondrion	79.63	82.69
KRH61056	Soybean	mitochondrion	72.22	78.0
KRH51719	Soybean	mitochondrion	72.22	78.0
CDX72733	Canola	mitochondrion	74.07	76.92
CDY22408	Canola	mitochondrion	74.07	76.92
GSMUA_Achr1P02500_001	Banana	mitochondrion	69.44	75.76
GSMUA_Achr5P11350_001	Banana	mitochondrion	68.52	75.51
CDY41947	Canola	mitochondrion	73.15	75.24
CDY42589	Canola	mitochondrion	72.22	74.29
CDX82007	Canola	mitochondrion	71.3	74.04
CDY13831	Canola	mitochondrion	71.3	74.04
CDY70461	Canola	mitochondrion	73.15	73.83
CDY63257	Canola	mitochondrion	73.15	73.83
CDX76303	Canola	mitochondrion	73.15	73.83
CDX75460	Canola	mitochondrion	73.15	73.83
Solyc04g081270.1.1	Tomato	mitochondrion	73.15	73.15
CDX69086	Canola	mitochondrion	72.22	72.9
GSMUA_Achr11P...	Banana	mitochondrion	69.44	72.82
CDY44482	Canola	mitochondrion	75.93	72.57
CDY55152	Canola	cytosol, mitochondrion	75.93	72.57
GSMUA_Achr3P11290_001	Banana	mitochondrion	67.59	71.57
CDX72500	Canola	mitochondrion	70.37	71.03
CDY29398	Canola	cytosol, mitochondrion	74.07	70.8
CDY45331	Canola	mitochondrion	69.44	70.09
CDY47053	Canola	mitochondrion, plastid	63.89	69.7
PGSC0003DMT400009665	Potato	mitochondrion	69.44	69.44
CDX75553	Canola	mitochondrion, plastid	65.74	68.27
CDX69199	Canola	mitochondrion, plastid	65.74	68.27
CDX72576	Canola	mitochondrion	62.04	67.68
CDY24829	Canola	mitochondrion	64.81	67.31
CDY08909	Canola	mitochondrion	64.81	67.31
GSMUA_Achr7P06520_001	Banana	mitochondrion	63.89	66.99
GSMUA_Achr1P19860_001	Banana	mitochondrion	65.74	66.98
GSMUA_Achr1P06110_001	Banana	mitochondrion	61.11	66.67
CDX89731	Canola	mitochondrion	65.74	65.74
CDY02251	Canola	mitochondrion	64.81	64.81
CDY38169	Canola	cytosol, mitochondrion, nucleus	62.04	62.04
CDY68553	Canola	cytosol, mitochondrion, nucleus	62.04	62.04
CDY30334	Canola	cytosol, mitochondrion, nucleus	61.11	61.11
CDY54551	Canola	cytosol, mitochondrion, nucleus	61.11	61.11
Zm00001d051802_P001	Maize	mitochondrion	60.19	56.52
CDY18596	Canola	cytosol, mitochondrion, nucleus	51.85	56.0
Os02t0445100-01	Rice	mitochondrion	49.07	55.21
CDX81404	Canola	cytosol, mitochondrion, nucleus	50.93	55.0
Os06t0137400-00	Rice	mitochondrion	59.26	53.78
Os02t0445600-01	Rice	cytosol, mitochondrion	48.15	53.61
Zm00001d045423_P001	Maize	cytosol	59.26	51.2
TraesCS4A01G375500.1	Wheat	mitochondrion	55.56	50.42
KXG19242	Sorghum	mitochondrion	59.26	50.39
TraesCS7A01G077000.1	Wheat	mitochondrion	55.56	50.0
CDX73741	Canola	cytosol, mitochondrion, nucleus	47.22	49.51
TraesCS7D01G072600.1	Wheat	mitochondrion	55.56	48.0
Zm00001d004578_P001	Maize	plastid	48.15	41.94
Zm00001d012222_P001	Maize	cytosol	51.85	37.33
CDY20904	Canola	cytosol, extracellular	42.59	36.22
CDX90724	Canola	cytosol	32.41	35.71
CDY05061	Canola	cytosol	32.41	35.71
Zm00001d051962_P001	Maize	cytosol	51.85	35.0
CDY10388	Canola	mitochondrion	34.26	34.58
CDX70314	Canola	mitochondrion	34.26	34.58
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	54.63	32.78
CDY18466	Canola	cytosol, mitochondrion	35.19	32.2
CDX91329	Canola	cytosol	36.11	31.2
CDX74993	Canola	cytosol	36.11	31.2
CDY46750	Canola	cytosol	35.19	30.65
CDX79712	Canola	cytosol	35.19	30.65
CDY44355	Canola	mitochondrion	31.48	30.63
CDY62892	Canola	mitochondrion	31.48	30.63
CDX78160	Canola	cytosol	32.41	26.92
CDX73568	Canola	cytosol	32.41	26.92
CDY13307	Canola	cytosol	31.48	25.95
CDX67565	Canola	cytosol	31.48	25.95
Zm00001d008420_P001	Maize	cytosol	39.81	18.3
Zm00001d021237_P001	Maize	cytosol	39.81	15.14
Zm00001d033729_P001	Maize	nucleus	49.07	14.48
Zm00001d027753_P001	Maize	nucleus	41.67	10.64
Zm00001d053311_P001	Maize	nucleus	22.22	7.02

Protein Annotations

EnsemblPlants:CDX85905	EnsemblPlantsGene:GSBRNA2T00143729001	GO:A0A078D9I2	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:CDX85905	ProteinID:CDX85905.1
SEG:seg	UniParc:UPI0004EB5E9F	MapMan:35.1	:	:	:

Description

BnaC06g22290D

Coordinates

chrLK031843:+:746709..747097

Molecular Weight (calculated)

12300.0 Da

IEP (calculated)

6.248

GRAVY (calculated)

-0.263

Length

108 amino acids

Sequence
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NEYSEDENGH PLDVPKGHFV VYVGENRVRY VVPILLLTRP EFQLLLQQAE EEFGFDHEMG LTIPCEEVVF
101: QSLTSMLG

Best Arabidopsis Sequence Match ( AT1G19830.1 )
(BLAST)

001: MAIINRSKLT QTTMIKQILK RCSSLGKKQS SEYNDTHEHD GDSLPLDVPK GHFVVYVGGN RVRYVLPISF LTRPEFQLLL QQAEEEFGFD HNMGLTIPCE
101: EVAFKSLITS MLQPTYI

Arabidopsis Description

At1g19830 [Source:UniProtKB/TrEMBL;Acc:Q9FXI0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.