CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023093.1-P	Field mustard	cytosol	96.77	96.77
CDY46750	Canola	cytosol	96.77	96.77
CDY18466	Canola	cytosol, mitochondrion	80.65	84.75
CDX91329	Canola	cytosol	84.68	84.0
CDX74993	Canola	cytosol	83.87	83.2
AT2G37030.1	Thale cress	cytosol	78.23	78.23
CDX78160	Canola	cytosol	65.32	62.31
CDX73568	Canola	cytosol	65.32	62.31
CDY13307	Canola	cytosol	61.29	58.02
CDX67565	Canola	cytosol	61.29	58.02
PGSC0003DMT400055533	Potato	cytosol	53.23	54.55
Solyc09g007970.1.1	Tomato	cytosol	53.23	54.55
KRH19939	Soybean	cytosol	53.23	53.66
CDX70314	Canola	mitochondrion	45.97	53.27
KRH32539	Soybean	cytosol	52.42	52.0
VIT_08s0040g01670.t01	Wine grape	mitochondrion	51.61	51.61
CDY10388	Canola	mitochondrion	43.55	50.47
PGSC0003DMT400080544	Potato	cytosol	49.19	50.0
Solyc10g086200.1.1	Tomato	cytosol	49.19	49.59
KRH67711	Soybean	cytosol	41.94	49.06
CDY62892	Canola	mitochondrion	42.74	47.75
KRG95997	Soybean	mitochondrion	47.58	47.2
CDY44355	Canola	mitochondrion	41.94	46.85
OQU81983	Sorghum	mitochondrion	40.32	39.68
Zm00001d003018_P001	Maize	mitochondrion	37.9	37.01
CDX68122	Canola	mitochondrion	31.45	36.11
CDY47511	Canola	mitochondrion	31.45	36.11
CDX73181	Canola	mitochondrion	31.45	36.11
CDX82007	Canola	mitochondrion	29.84	35.58
CDY13831	Canola	mitochondrion	29.84	35.58
CDX72733	Canola	mitochondrion	29.84	35.58
CDY22408	Canola	mitochondrion	29.84	35.58
CDY41947	Canola	mitochondrion	29.84	35.24
CDY39041	Canola	mitochondrion	30.65	35.19
CDX85905	Canola	mitochondrion	30.65	35.19
CDY13560	Canola	mitochondrion	30.65	35.19
CDY18596	Canola	cytosol, mitochondrion, nucleus	28.23	35.0
Os04t0517900-01	Rice	mitochondrion	36.29	34.88
CDX75460	Canola	mitochondrion	29.84	34.58
CDY55152	Canola	cytosol, mitochondrion	31.45	34.51
CDY42589	Canola	mitochondrion	29.03	34.29
CDX81404	Canola	cytosol, mitochondrion, nucleus	27.42	34.0
CDX69086	Canola	mitochondrion	29.03	33.64
CDY29398	Canola	cytosol, mitochondrion	30.65	33.63
CDY44482	Canola	mitochondrion	30.65	33.63
CDY47053	Canola	mitochondrion, plastid	26.61	33.33
CDX72576	Canola	mitochondrion	26.61	33.33
CDX72500	Canola	mitochondrion	27.42	31.78
CDY63257	Canola	mitochondrion	27.42	31.78
CDX76303	Canola	mitochondrion	27.42	31.78
CDY70461	Canola	mitochondrion	27.42	31.78
CDX69199	Canola	mitochondrion, plastid	26.61	31.73
CDX75553	Canola	mitochondrion, plastid	26.61	31.73
CDY08909	Canola	mitochondrion	26.61	31.73
CDY24829	Canola	mitochondrion	26.61	31.73
CDY45331	Canola	mitochondrion	26.61	30.84
CDX73741	Canola	cytosol, mitochondrion, nucleus	25.0	30.1
CDY68553	Canola	cytosol, mitochondrion, nucleus	25.81	29.63
CDY54551	Canola	cytosol, mitochondrion, nucleus	25.0	28.7
CDY38169	Canola	cytosol, mitochondrion, nucleus	25.0	28.7
CDY30334	Canola	cytosol, mitochondrion, nucleus	25.0	28.7
CDX89731	Canola	mitochondrion	25.0	28.7
TraesCS2A01G381300.1	Wheat	plastid	34.68	27.92
TraesCS2B01G398600.1	Wheat	cytosol, plastid	33.87	27.81
CDY02251	Canola	mitochondrion	24.19	27.78
CDY05061	Canola	cytosol	21.77	27.55
CDX90724	Canola	cytosol	21.77	27.55
HORVU2Hr1G089400.1	Barley	plastid	34.68	27.39
TraesCS2D01G377800.1	Wheat	plastid	33.06	26.45
CDY20904	Canola	cytosol, extracellular	24.19	23.62
GSMUA_Achr1P09150_001	Banana	nucleus	36.29	23.56

Protein Annotations

EnsemblPlants:CDX79712	EnsemblPlantsGene:GSBRNA2T00132522001	GO:A0A078CSI7	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	ProteinID:CDX79712	ProteinID:CDX79712.1
UniParc:UPI0004EC284E	MapMan:35.2	:	:	:	:

Description

BnaC03g20480D

Coordinates

chrLK031818:+:1830314..1830688

Molecular Weight (calculated)

14194.8 Da

IEP (calculated)

9.642

GRAVY (calculated)

-0.021

Length

124 amino acids

Sequence
(BLAST)

001: MKSKFIKSCE KKLKMMTCKV ITPCTFCKTC CQRIYQAFEK KAEVIPKDVP KGHLVVYVGE ESRRFVIKIS LLTHPLFKAL LDQAQDAYGF SADSRLWIPC
101: DVSTFLHVVR CAGAPRRQNK CMCI

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.