Factsheet for Bra023093.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46750	Canola	cytosol	100.0	100.0
CDX79712	Canola	cytosol	96.77	96.77
Bra005223.1-P	Field mustard	cytosol	87.1	86.4
Bra017211.1-P	Field mustard	mitochondrion	81.45	85.59
AT2G37030.1	Thale cress	cytosol	80.65	80.65
Bra006984.1-P	Field mustard	cytosol	66.94	63.85
Bra003125.1-P	Field mustard	cytosol	62.9	59.54
PGSC0003DMT400055533	Potato	cytosol	53.23	54.55
Solyc09g007970.1.1	Tomato	cytosol	53.23	54.55
KRH19939	Soybean	cytosol	54.03	54.47
Bra009535.1-P	Field mustard	mitochondrion	45.97	53.27
KRH32539	Soybean	cytosol	53.23	52.8
VIT_08s0040g01670.t01	Wine grape	mitochondrion	52.42	52.42
PGSC0003DMT400080544	Potato	cytosol	50.0	50.82
Solyc10g086200.1.1	Tomato	cytosol	50.0	50.41
KRH67711	Soybean	cytosol	42.74	50.0
Bra028841.1-P	Field mustard	mitochondrion	42.74	47.75
KRG95997	Soybean	mitochondrion	47.58	47.2
OQU81983	Sorghum	mitochondrion	41.13	40.48
Bra008207.1-P	Field mustard	cytosol, mitochondrion	29.03	37.89
Zm00001d003018_P001	Maize	mitochondrion	38.71	37.8
Bra003746.1-P	Field mustard	mitochondrion	31.45	36.11
Os04t0517900-01	Rice	mitochondrion	37.1	35.66
Bra031171.1-P	Field mustard	mitochondrion	29.84	35.58
Bra033581.1-P	Field mustard	mitochondrion	29.84	35.58
Bra011889.1-P	Field mustard	mitochondrion	29.84	35.24
Bra015832.1-P	Field mustard	mitochondrion	30.65	35.19
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	28.23	35.0
Bra011560.1-P	Field mustard	mitochondrion	29.84	34.58
Bra025770.1-P	Field mustard	cytosol, mitochondrion	31.45	34.51
Bra017747.1-P	Field mustard	mitochondrion, plastid	26.61	33.33
Bra034651.1-P	Field mustard	mitochondrion	27.42	32.69
Bra011662.1-P	Field mustard	mitochondrion, plastid	26.61	31.73
Bra010501.1-P	Field mustard	mitochondrion	26.61	31.73
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	26.61	31.43
Bra017676.1-P	Field mustard	mitochondrion	26.61	30.84
Bra024482.1-P	Field mustard	mitochondrion	25.81	29.63
Bra039909.1-P	Field mustard	mitochondrion	25.0	28.7
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	25.0	28.7
TraesCS2A01G381300.1	Wheat	plastid	35.48	28.57
TraesCS2B01G398600.1	Wheat	cytosol, plastid	34.68	28.48
HORVU2Hr1G089400.1	Barley	plastid	35.48	28.03
Bra013061.1-P	Field mustard	mitochondrion	24.19	27.78
Bra000682.1-P	Field mustard	cytosol	21.77	27.55
TraesCS2D01G377800.1	Wheat	plastid	33.87	27.1
GSMUA_Achr1P09150_001	Banana	nucleus	36.29	23.56

Protein Annotations

EnsemblPlants:Bra023093.1	EnsemblPlants:Bra023093.1-P	EnsemblPlantsGene:Bra023093	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	UniParc:UPI000253FF87	UniProt:M4E2U2
MapMan:35.2	:	:	:	:	:

Description

AT2G37030 (E=1e-056) | auxin-responsive family protein

Coordinates

chrA03:+:8656924..8657298

Molecular Weight (calculated)

14187.9 Da

IEP (calculated)

9.881

GRAVY (calculated)

0.020

Length

124 amino acids

Sequence
(BLAST)

001: MKSKFIKSCE KKLKMMTCKV IPPCTFCKTC CQRICWAFKK KAEVIPKDVP KGHLVVYVGE ESRRFVIKIS LLTHPLFKAL LDQAQDAYGF SADSRLWIPC
101: DVSTFLHVVR CAGAPRRQNK CMCI

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.