Factsheet for Bra037243.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54551	Canola	cytosol, mitochondrion, nucleus	100.0	100.0
CDY30334	Canola	cytosol, mitochondrion, nucleus	100.0	100.0
Bra039909.1-P	Field mustard	mitochondrion	91.67	91.67
AT2G18010.1	Thale cress	cytosol, plastid	88.89	85.71
Bra024482.1-P	Field mustard	mitochondrion	85.19	85.19
Bra010501.1-P	Field mustard	mitochondrion	69.44	72.12
Bra011662.1-P	Field mustard	mitochondrion, plastid	67.59	70.19
Bra017747.1-P	Field mustard	mitochondrion, plastid	63.89	69.7
Bra034651.1-P	Field mustard	mitochondrion	65.74	68.27
Bra008207.1-P	Field mustard	cytosol, mitochondrion	59.26	67.37
Bra011560.1-P	Field mustard	mitochondrion	66.67	67.29
Bra013061.1-P	Field mustard	mitochondrion	66.67	66.67
Solyc03g033590.1.1	Tomato	mitochondrion	60.19	65.66
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	57.41	64.58
Bra017676.1-P	Field mustard	mitochondrion	63.89	64.49
KRH28787	Soybean	cytosol, mitochondrion	62.04	64.42
PGSC0003DMT400058186	Potato	cytosol	59.26	64.0
Bra015832.1-P	Field mustard	mitochondrion	63.89	63.89
PGSC0003DMT400075050	Potato	cytosol	56.48	63.54
PGSC0003DMT400009439	Potato	mitochondrion	59.26	63.37
KRH08093	Soybean	cytosol	62.04	63.21
Solyc02g084010.1.1	Tomato	mitochondrion	59.26	62.75
KRH69796	Soybean	cytosol	62.04	62.62
Bra031171.1-P	Field mustard	mitochondrion	60.19	62.5
Bra033581.1-P	Field mustard	mitochondrion	60.19	62.5
VIT_04s0023g03230.t01	Wine grape	mitochondrion	60.19	62.5
Bra003746.1-P	Field mustard	mitochondrion	62.04	62.04
Bra011889.1-P	Field mustard	mitochondrion	60.19	61.9
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	51.85	56.0
Bra025770.1-P	Field mustard	cytosol, mitochondrion	57.41	54.87
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	43.52	44.76
KRH76667	Soybean	cytosol, plastid	62.04	44.37
Bra000682.1-P	Field mustard	cytosol	29.63	32.65
Bra017211.1-P	Field mustard	mitochondrion	28.7	26.27
Bra009535.1-P	Field mustard	mitochondrion	25.0	25.23
Bra023093.1-P	Field mustard	cytosol	28.7	25.0
Bra005223.1-P	Field mustard	cytosol	27.78	24.0
Bra028841.1-P	Field mustard	mitochondrion	24.07	23.42
Bra003125.1-P	Field mustard	cytosol	27.78	22.9
Bra006984.1-P	Field mustard	cytosol	25.93	21.54

Protein Annotations

EnsemblPlants:Bra037243.1	EnsemblPlants:Bra037243.1-P	EnsemblPlantsGene:Bra037243	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF41	PFAM:PF02519	UniParc:UPI0002541E6A	UniProt:M4F832
MapMan:35.1	:	:	:	:	:

Description

AT2G18010 (E=2e-049) | auxin-responsive family protein

Coordinates

chrA09:+:4817510..4817836

Molecular Weight (calculated)

12548.0 Da

IEP (calculated)

8.470

GRAVY (calculated)

-0.429

Length

108 amino acids

Sequence
(BLAST)

001: MTIKRSSQAT SIKQILKRCS SLGKKKNVNG CYYNQEDDSF PQDVPKGHFP VYVGPNRSRY IVPISWLEYS EFQTLLRLAE EEFGFDHNMG LIIPCDEGFF
101: RSLISMFR

Best Arabidopsis Sequence Match ( AT2G18010.1 )
(BLAST)

001: MAIKRSSKAT SSQAASIKQI VKRCSSLRKM KNVNGCYYNQ EDDLPQDVPK GHFPVYVGPN RSRYIVPISW LHHSEFQTLL RLAEEEFGFD HDMGLTIPCD
101: EVFFRSLISM FR

Arabidopsis Description

Putative auxin-regulated protein [Source:UniProtKB/TrEMBL;Acc:Q9SL45]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.