Factsheet for Bra000682.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90724	Canola	cytosol	100.0	100.0
CDY05061	Canola	cytosol	98.98	98.98
AT4G09530.1	Thale cress	cytosol	86.73	82.52
VIT_07s0130g00100.t01	Wine grape	cytosol	41.84	51.25
KRH63924	Soybean	cytosol	40.82	50.63
KRH54020	Soybean	cytosol	40.82	50.0
Solyc06g065220.1.1	Tomato	cytosol	46.94	47.42
PGSC0003DMT400067154	Potato	cytosol	47.96	44.76
Bra008207.1-P	Field mustard	cytosol, mitochondrion	35.71	36.84
Bra015832.1-P	Field mustard	mitochondrion	38.78	35.19
Bra003746.1-P	Field mustard	mitochondrion	35.71	32.41
Bra017747.1-P	Field mustard	mitochondrion, plastid	32.65	32.32
Bra031171.1-P	Field mustard	mitochondrion	33.67	31.73
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	31.63	31.0
Bra017676.1-P	Field mustard	mitochondrion	33.67	30.84
Bra011560.1-P	Field mustard	mitochondrion	33.67	30.84
Bra011662.1-P	Field mustard	mitochondrion, plastid	32.65	30.77
Bra010501.1-P	Field mustard	mitochondrion	32.65	30.77
Bra034651.1-P	Field mustard	mitochondrion	32.65	30.77
Bra013061.1-P	Field mustard	mitochondrion	33.67	30.56
Bra011889.1-P	Field mustard	mitochondrion	32.65	30.48
Bra033581.1-P	Field mustard	mitochondrion	31.63	29.81
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	32.65	29.63
Bra039909.1-P	Field mustard	mitochondrion	31.63	28.7
Bra024482.1-P	Field mustard	mitochondrion	29.59	26.85
Bra025770.1-P	Field mustard	cytosol, mitochondrion	30.61	26.55
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	27.55	25.71
Bra017211.1-P	Field mustard	mitochondrion	28.57	23.73
Bra023093.1-P	Field mustard	cytosol	27.55	21.77
Bra005223.1-P	Field mustard	cytosol	27.55	21.6
Bra006984.1-P	Field mustard	cytosol	27.55	20.77
Bra003125.1-P	Field mustard	cytosol	26.53	19.85
Bra009535.1-P	Field mustard	mitochondrion	21.43	19.63
Bra028841.1-P	Field mustard	mitochondrion	21.43	18.92

Protein Annotations

EnsemblPlants:Bra000682.1	EnsemblPlants:Bra000682.1-P	EnsemblPlantsGene:Bra000682	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF55	PFAM:PF02519	UniParc:UPI00025402F2	UniProt:M4C904
MapMan:35.2	:	:	:	:	:

Description

AT4G09530 (E=6e-040) | auxin-responsive family protein

Coordinates

chrA03:-:12431397..12431693

Molecular Weight (calculated)

11237.4 Da

IEP (calculated)

8.519

GRAVY (calculated)

-0.429

Length

98 amino acids

Sequence
(BLAST)

1: MPNKVADMHF HREEEEDAGA IRRSSSRTPR GHFVVYVGTK LERFVVPTRF LKSPSFQNLL EKAAEEFGYA EAHPNKIVLP CDVSTFRSLV MFLTSHDK

Best Arabidopsis Sequence Match ( AT4G09530.1 )
(BLAST)

001: MPHKVIDMHF HEREEEEDTG ESRSSSRTPR GHFVVYVGTK KKLERFVIPT TFLKSPSFQK LLDNAAEEFG YAEAHRDKIV LPCDVSTFRS LVMFLTSHQD
101: KSH

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9M0P0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.