Factsheet for Bra017211.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18466	Canola	cytosol, mitochondrion	98.31	98.31
Bra005223.1-P	Field mustard	cytosol	86.44	81.6
Bra023093.1-P	Field mustard	cytosol	85.59	81.45
AT2G37030.1	Thale cress	cytosol	82.2	78.23
Bra006984.1-P	Field mustard	cytosol	66.1	60.0
Bra003125.1-P	Field mustard	cytosol	64.41	58.02
KRH19939	Soybean	cytosol	56.78	54.47
KRH32539	Soybean	cytosol	55.93	52.8
PGSC0003DMT400055533	Potato	cytosol	52.54	51.24
Solyc09g007970.1.1	Tomato	cytosol	52.54	51.24
VIT_08s0040g01670.t01	Wine grape	mitochondrion	53.39	50.81
Bra009535.1-P	Field mustard	mitochondrion	44.92	49.53
PGSC0003DMT400080544	Potato	cytosol	50.85	49.18
Solyc10g086200.1.1	Tomato	cytosol	50.85	48.78
KRH67711	Soybean	cytosol	42.37	47.17
KRG95997	Soybean	mitochondrion	49.15	46.4
Bra028841.1-P	Field mustard	mitochondrion	43.22	45.95
OQU81983	Sorghum	mitochondrion	41.53	38.89
Bra008207.1-P	Field mustard	cytosol, mitochondrion	30.51	37.89
Os04t0517900-01	Rice	mitochondrion	39.83	36.43
Zm00001d003018_P001	Maize	mitochondrion	38.98	36.22
Bra003746.1-P	Field mustard	mitochondrion	32.2	35.19
Bra015832.1-P	Field mustard	mitochondrion	32.2	35.19
Bra031171.1-P	Field mustard	mitochondrion	30.51	34.62
Bra017747.1-P	Field mustard	mitochondrion, plastid	28.81	34.34
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	28.81	34.0
Bra033581.1-P	Field mustard	mitochondrion	29.66	33.65
Bra025770.1-P	Field mustard	cytosol, mitochondrion	32.2	33.63
Bra011889.1-P	Field mustard	mitochondrion	29.66	33.33
Bra011560.1-P	Field mustard	mitochondrion	29.66	32.71
Bra011662.1-P	Field mustard	mitochondrion, plastid	28.81	32.69
Bra034651.1-P	Field mustard	mitochondrion	27.97	31.73
Bra010501.1-P	Field mustard	mitochondrion	27.97	31.73
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	27.12	30.48
Bra017676.1-P	Field mustard	mitochondrion	27.12	29.91
Bra024482.1-P	Field mustard	mitochondrion	27.12	29.63
Bra013061.1-P	Field mustard	mitochondrion	27.12	29.63
TraesCS2A01G381300.1	Wheat	plastid	38.14	29.22
TraesCS2B01G398600.1	Wheat	cytosol, plastid	37.29	29.14
Bra039909.1-P	Field mustard	mitochondrion	26.27	28.7
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	26.27	28.7
Bra000682.1-P	Field mustard	cytosol	23.73	28.57
TraesCS2D01G377800.1	Wheat	plastid	36.44	27.74
HORVU2Hr1G089400.1	Barley	plastid	35.59	26.75
GSMUA_Achr1P09150_001	Banana	nucleus	35.59	21.99

Protein Annotations

EnsemblPlants:Bra017211.1	EnsemblPlants:Bra017211.1-P	EnsemblPlantsGene:Bra017211	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	UniParc:UPI000254442D	UniProt:M4DL30
MapMan:35.2	:	:	:	:	:

Description

AT2G37030 (E=1e-051) | auxin-responsive family protein

Coordinates

chrA04:+:16022845..16023201

Molecular Weight (calculated)

13368.6 Da

IEP (calculated)

8.761

GRAVY (calculated)

0.091

Length

118 amino acids

Sequence
(BLAST)

001: MKTKFIKSCE KKLKKMTVTT PCKFCERICL AFKREAEVIP KDVPKGHLVV YVGEESMRFV IKISLLAHPL FKALLDQAQD AYGFSADARL WIPCDVSTFL
101: DVVRCAGSPQ YQNSCMCI

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.