Factsheet for TraesCS2B01G398600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G377800.1	Wheat	plastid	88.74	86.45
TraesCS2A01G381300.1	Wheat	plastid	88.08	86.36
HORVU2Hr1G089400.1	Barley	plastid	84.11	80.89
Os04t0517900-01	Rice	mitochondrion	61.59	72.09
OQU81983	Sorghum	mitochondrion	58.28	69.84
Zm00001d003018_P001	Maize	mitochondrion	54.3	64.57
KRH19939	Soybean	cytosol	37.75	46.34
KRH32539	Soybean	cytosol	36.42	44.0
VIT_08s0040g01670.t01	Wine grape	mitochondrion	32.45	39.52
KRH67711	Soybean	cytosol	26.49	37.74
Bra017211.1-P	Field mustard	mitochondrion	29.14	37.29
CDY18466	Canola	cytosol, mitochondrion	29.14	37.29
KRH34853	Soybean	mitochondrion	28.48	36.44
KRG95997	Soybean	mitochondrion	29.14	35.2
Solyc09g007970.1.1	Tomato	cytosol	27.81	34.71
PGSC0003DMT400055533	Potato	cytosol	27.81	34.71
Bra023093.1-P	Field mustard	cytosol	28.48	34.68
CDY46750	Canola	cytosol	28.48	34.68
CDY10388	Canola	mitochondrion	24.5	34.58
CDX70314	Canola	mitochondrion	24.5	34.58
Bra009535.1-P	Field mustard	mitochondrion	24.5	34.58
AT2G37030.1	Thale cress	cytosol	27.81	33.87
CDX79712	Canola	cytosol	27.81	33.87
CDX91329	Canola	cytosol	27.81	33.6
CDX74993	Canola	cytosol	27.81	33.6
AT5G03310.1	Thale cress	mitochondrion	25.17	33.33
Bra005223.1-P	Field mustard	cytosol	27.15	32.8
PGSC0003DMT400080544	Potato	cytosol	26.49	32.79
CDY62892	Canola	mitochondrion	23.84	32.43
Bra028841.1-P	Field mustard	mitochondrion	23.84	32.43
Solyc10g086200.1.1	Tomato	cytosol	25.83	31.71
CDY44355	Canola	mitochondrion	23.18	31.53
KRG91926	Soybean	mitochondrion	25.83	31.2
GSMUA_Achr1P09150_001	Banana	nucleus	37.09	29.32
CDX78160	Canola	cytosol	24.5	28.46
CDX73568	Canola	cytosol	24.5	28.46
Bra006984.1-P	Field mustard	cytosol	24.5	28.46
CDX67565	Canola	cytosol	23.84	27.48
Bra003125.1-P	Field mustard	cytosol	23.84	27.48
CDY13307	Canola	cytosol	23.18	26.72
AT3G53250.2	Thale cress	endoplasmic reticulum, extracellular	26.49	25.81

Protein Annotations

EnsemblPlants:TraesCS2B01G398600.1	EnsemblPlantsGene:TraesCS2B01G398600	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	SEG:seg	MapMan:35.1	:

Description

No Description!

Coordinates

chr2B:-:566382321..566382776

Molecular Weight (calculated)

17023.4 Da

IEP (calculated)

7.425

GRAVY (calculated)

-0.221

Length

151 amino acids

Sequence
(BLAST)

001: MQQCYTDTQT HVRMLRSSGM KGGRRSNRRL LRSFLAACRK LSAELQLLGA AAPTASAWVQ LEAGGGGDET IPVDVPRGHT VVYVGEELRR YVVRVSSLDH
101: PLFRELLDRA REEYEFAADA RLCLPCDEEI FLAVLCHVDS KHDYWRLALC S

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.