Factsheet for Bra005223.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74993	Canola	cytosol	95.2	95.2
CDX91329	Canola	cytosol	94.4	94.4
Bra023093.1-P	Field mustard	cytosol	86.4	87.1
Bra017211.1-P	Field mustard	mitochondrion	81.6	86.44
AT2G37030.1	Thale cress	cytosol	79.2	79.84
Bra006984.1-P	Field mustard	cytosol	67.2	64.62
Bra003125.1-P	Field mustard	cytosol	64.8	61.83
VIT_08s0040g01670.t01	Wine grape	mitochondrion	55.2	55.65
PGSC0003DMT400055533	Potato	cytosol	53.6	55.37
Solyc09g007970.1.1	Tomato	cytosol	53.6	55.37
KRH19939	Soybean	cytosol	54.4	55.28
KRH32539	Soybean	cytosol	54.4	54.4
Bra009535.1-P	Field mustard	mitochondrion	45.6	53.27
KRH67711	Soybean	cytosol	44.0	51.89
Solyc10g086200.1.1	Tomato	cytosol	50.4	51.22
PGSC0003DMT400080544	Potato	cytosol	48.8	50.0
KRG95997	Soybean	mitochondrion	49.6	49.6
Bra028841.1-P	Field mustard	mitochondrion	41.6	46.85
OQU81983	Sorghum	mitochondrion	39.2	38.89
Bra008207.1-P	Field mustard	cytosol, mitochondrion	28.8	37.89
Zm00001d003018_P001	Maize	mitochondrion	37.6	37.01
Bra003746.1-P	Field mustard	mitochondrion	31.2	36.11
Bra033581.1-P	Field mustard	mitochondrion	29.6	35.58
Bra011889.1-P	Field mustard	mitochondrion	29.6	35.24
Bra015832.1-P	Field mustard	mitochondrion	30.4	35.19
Bra031171.1-P	Field mustard	mitochondrion	28.8	34.62
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	27.2	34.0
Bra025770.1-P	Field mustard	cytosol, mitochondrion	30.4	33.63
Os04t0517900-01	Rice	mitochondrion	34.4	33.33
Bra011560.1-P	Field mustard	mitochondrion	28.0	32.71
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	27.2	32.38
Bra017747.1-P	Field mustard	mitochondrion, plastid	25.6	32.32
Bra034651.1-P	Field mustard	mitochondrion	26.4	31.73
Bra011662.1-P	Field mustard	mitochondrion, plastid	26.4	31.73
Bra017676.1-P	Field mustard	mitochondrion	26.4	30.84
Bra010501.1-P	Field mustard	mitochondrion	25.6	30.77
Bra024482.1-P	Field mustard	mitochondrion	24.8	28.7
Bra039909.1-P	Field mustard	mitochondrion	24.0	27.78
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	24.0	27.78
Bra013061.1-P	Field mustard	mitochondrion	24.0	27.78
Bra000682.1-P	Field mustard	cytosol	21.6	27.55
TraesCS2A01G381300.1	Wheat	plastid	33.6	27.27
TraesCS2B01G398600.1	Wheat	cytosol, plastid	32.8	27.15
HORVU2Hr1G089400.1	Barley	plastid	33.6	26.75
TraesCS2D01G377800.1	Wheat	plastid	32.0	25.81
GSMUA_Achr1P09150_001	Banana	nucleus	34.4	22.51

Protein Annotations

EnsemblPlants:Bra005223.1	EnsemblPlants:Bra005223.1-P	EnsemblPlantsGene:Bra005223	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	UniParc:UPI0002547A95	UniProt:M4CLY6
MapMan:35.2	:	:	:	:	:

Description

AT2G37030 (E=4e-054) | auxin-responsive family protein

Coordinates

chrA05:-:4105009..4105386

Molecular Weight (calculated)

14063.3 Da

IEP (calculated)

8.722

GRAVY (calculated)

0.002

Length

125 amino acids

Sequence
(BLAST)

001: MKSKFIKSCE KKLKVMTSKV TTPCTFCETC CQRFCLAFKK EAQTIPKDVP KGHLVVYVGE ESRRFVIKIT LLTHPLFKAL LDQAQDAYGF SSADSRLWIP
101: CDVSTFLNVV RCAGAPQDQS NCMCI

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.