Factsheet for Bra015832.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47511	Canola	mitochondrion	99.07	99.07
CDX73181	Canola	mitochondrion	98.15	98.15
AT1G75580.1	Thale cress	mitochondrion	93.52	93.52
Bra003746.1-P	Field mustard	mitochondrion	93.52	93.52
Bra008207.1-P	Field mustard	cytosol, mitochondrion	81.48	92.63
VIT_18s0001g13980.t01	Wine grape	mitochondrion	76.85	79.81
KRH61056	Soybean	mitochondrion	72.22	78.0
KRH51719	Soybean	mitochondrion	72.22	78.0
Bra034651.1-P	Field mustard	mitochondrion	74.07	76.92
Bra011560.1-P	Field mustard	mitochondrion	75.93	76.64
GSMUA_Achr1P02500_001	Banana	mitochondrion	69.44	75.76
GSMUA_Achr5P11350_001	Banana	mitochondrion	68.52	75.51
Solyc04g081270.1.1	Tomato	mitochondrion	75.0	75.0
Bra031171.1-P	Field mustard	mitochondrion	72.22	75.0
Bra033581.1-P	Field mustard	mitochondrion	72.22	75.0
Bra011889.1-P	Field mustard	mitochondrion	72.22	74.29
GSMUA_Achr3P11290_001	Banana	mitochondrion	69.44	73.53
Bra017676.1-P	Field mustard	mitochondrion	72.22	72.9
GSMUA_Achr11P...	Banana	mitochondrion	69.44	72.82
PGSC0003DMT400009665	Potato	mitochondrion	72.22	72.22
Bra017747.1-P	Field mustard	mitochondrion, plastid	64.81	70.71
Bra025770.1-P	Field mustard	cytosol, mitochondrion	73.15	69.91
GSMUA_Achr1P06110_001	Banana	mitochondrion	63.89	69.7
GSMUA_Achr7P06520_001	Banana	mitochondrion	65.74	68.93
GSMUA_Achr1P19860_001	Banana	mitochondrion	67.59	68.87
Bra011662.1-P	Field mustard	mitochondrion, plastid	65.74	68.27
Bra010501.1-P	Field mustard	mitochondrion	65.74	68.27
Bra013061.1-P	Field mustard	mitochondrion	67.59	67.59
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	63.89	63.89
Bra039909.1-P	Field mustard	mitochondrion	62.96	62.96
Bra024482.1-P	Field mustard	mitochondrion	62.04	62.04
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	55.56	60.0
Os02t0445600-01	Rice	cytosol, mitochondrion	50.93	56.7
Os02t0445100-01	Rice	mitochondrion	50.0	56.25
Zm00001d051802_P001	Maize	mitochondrion	57.41	53.91
Os06t0137400-00	Rice	mitochondrion	57.41	52.1
TraesCS4A01G375500.1	Wheat	mitochondrion	54.63	49.58
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	48.15	49.52
TraesCS7A01G077000.1	Wheat	mitochondrion	54.63	49.17
Zm00001d045423_P001	Maize	cytosol	56.48	48.8
KXG19242	Sorghum	mitochondrion	56.48	48.03
TraesCS7D01G072600.1	Wheat	mitochondrion	54.63	47.2
Zm00001d004578_P001	Maize	plastid	46.3	40.32
Bra000682.1-P	Field mustard	cytosol	35.19	38.78
Zm00001d012222_P001	Maize	cytosol	50.0	36.0
Bra009535.1-P	Field mustard	mitochondrion	34.26	34.58
Zm00001d051962_P001	Maize	cytosol	50.0	33.75
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	53.7	32.22
Bra017211.1-P	Field mustard	mitochondrion	35.19	32.2
Bra023093.1-P	Field mustard	cytosol	35.19	30.65
Bra028841.1-P	Field mustard	mitochondrion	31.48	30.63
Bra005223.1-P	Field mustard	cytosol	35.19	30.4
Bra006984.1-P	Field mustard	cytosol	33.33	27.69
Bra003125.1-P	Field mustard	cytosol	32.41	26.72
Zm00001d008420_P001	Maize	cytosol	37.96	17.45
Zm00001d021237_P001	Maize	cytosol	37.04	14.08
Zm00001d033729_P001	Maize	nucleus	46.3	13.66
Zm00001d027753_P001	Maize	nucleus	38.89	9.93
Zm00001d053311_P001	Maize	nucleus	22.22	7.02

Protein Annotations

EnsemblPlants:Bra015832.1	EnsemblPlants:Bra015832.1-P	EnsemblPlantsGene:Bra015832	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	SEG:seg	UniParc:UPI0002541F84
UniProt:M4DH55	MapMan:35.1	:	:	:	:

Description

AT1G75580 (E=6e-044) | auxin-responsive protein, putative

Coordinates

chrA07:+:20629484..20629810

Molecular Weight (calculated)

12258.9 Da

IEP (calculated)

7.576

GRAVY (calculated)

-0.272

Length

108 amino acids

Sequence
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKHS NVYSEDENGH PLDVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCDEAVF
101: RSLTSMLG

Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR

Arabidopsis Description

At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.