CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47511	Canola	mitochondrion	99.07	99.07
Bra015832.1-P	Field mustard	mitochondrion	98.15	98.15
CDX68122	Canola	mitochondrion	93.52	93.52
AT1G75580.1	Thale cress	mitochondrion	93.52	93.52
CDX85905	Canola	mitochondrion	92.59	92.59
CDY39041	Canola	mitochondrion	91.67	91.67
CDY13560	Canola	mitochondrion	91.67	91.67
VIT_18s0001g13980.t01	Wine grape	mitochondrion	76.85	79.81
KRH61056	Soybean	mitochondrion	72.22	78.0
KRH51719	Soybean	mitochondrion	72.22	78.0
GSMUA_Achr1P02500_001	Banana	mitochondrion	70.37	76.77
GSMUA_Achr5P11350_001	Banana	mitochondrion	69.44	76.53
CDX75460	Canola	mitochondrion	75.0	75.7
CDY13831	Canola	mitochondrion	72.22	75.0
CDY22408	Canola	mitochondrion	72.22	75.0
CDX82007	Canola	mitochondrion	72.22	75.0
CDX72733	Canola	mitochondrion	72.22	75.0
CDX76303	Canola	mitochondrion	74.07	74.77
CDY70461	Canola	mitochondrion	74.07	74.77
CDY63257	Canola	mitochondrion	74.07	74.77
CDX69086	Canola	mitochondrion	74.07	74.77
CDY41947	Canola	mitochondrion	72.22	74.29
Solyc04g081270.1.1	Tomato	mitochondrion	74.07	74.07
GSMUA_Achr11P...	Banana	mitochondrion	70.37	73.79
GSMUA_Achr3P11290_001	Banana	mitochondrion	69.44	73.53
CDY42589	Canola	mitochondrion	71.3	73.33
CDY55152	Canola	cytosol, mitochondrion	75.93	72.57
CDX72500	Canola	mitochondrion	71.3	71.96
CDY45331	Canola	mitochondrion	71.3	71.96
CDY44482	Canola	mitochondrion	75.0	71.68
PGSC0003DMT400009665	Potato	mitochondrion	71.3	71.3
CDY29398	Canola	cytosol, mitochondrion	74.07	70.8
CDY47053	Canola	mitochondrion, plastid	64.81	70.71
GSMUA_Achr1P06110_001	Banana	mitochondrion	63.89	69.7
GSMUA_Achr7P06520_001	Banana	mitochondrion	65.74	68.93
GSMUA_Achr1P19860_001	Banana	mitochondrion	67.59	68.87
CDX72576	Canola	mitochondrion	62.96	68.69
CDY08909	Canola	mitochondrion	65.74	68.27
CDX69199	Canola	mitochondrion, plastid	65.74	68.27
CDY24829	Canola	mitochondrion	65.74	68.27
CDX75553	Canola	mitochondrion, plastid	65.74	68.27
CDX89731	Canola	mitochondrion	67.59	67.59
CDY02251	Canola	mitochondrion	66.67	66.67
CDY30334	Canola	cytosol, mitochondrion, nucleus	62.96	62.96
CDY54551	Canola	cytosol, mitochondrion, nucleus	62.96	62.96
CDY38169	Canola	cytosol, mitochondrion, nucleus	62.04	62.04
CDY68553	Canola	cytosol, mitochondrion, nucleus	62.04	62.04
CDY18596	Canola	cytosol, mitochondrion, nucleus	55.56	60.0
CDX81404	Canola	cytosol, mitochondrion, nucleus	54.63	59.0
Os02t0445100-01	Rice	mitochondrion	50.93	57.29
Os02t0445600-01	Rice	cytosol, mitochondrion	50.93	56.7
Zm00001d051802_P001	Maize	mitochondrion	58.33	54.78
Os06t0137400-00	Rice	mitochondrion	57.41	52.1
TraesCS4A01G375500.1	Wheat	mitochondrion	55.56	50.42
TraesCS7A01G077000.1	Wheat	mitochondrion	55.56	50.0
Zm00001d045423_P001	Maize	cytosol	57.41	49.6
KXG19242	Sorghum	mitochondrion	57.41	48.82
CDX73741	Canola	cytosol, mitochondrion, nucleus	46.3	48.54
TraesCS7D01G072600.1	Wheat	mitochondrion	55.56	48.0
Zm00001d004578_P001	Maize	plastid	45.37	39.52
CDX90724	Canola	cytosol	35.19	38.78
CDY05061	Canola	cytosol	35.19	38.78
CDY20904	Canola	cytosol, extracellular	43.52	37.01
Zm00001d012222_P001	Maize	cytosol	50.0	36.0
CDY10388	Canola	mitochondrion	34.26	34.58
CDX70314	Canola	mitochondrion	34.26	34.58
Zm00001d051962_P001	Maize	cytosol	50.0	33.75
CDY18466	Canola	cytosol, mitochondrion	36.11	33.05
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	54.63	32.78
CDX79712	Canola	cytosol	36.11	31.45
CDY46750	Canola	cytosol	36.11	31.45
CDX74993	Canola	cytosol	36.11	31.2
CDX91329	Canola	cytosol	36.11	31.2
CDY44355	Canola	mitochondrion	31.48	30.63
CDY62892	Canola	mitochondrion	31.48	30.63
CDX78160	Canola	cytosol	33.33	27.69
CDX73568	Canola	cytosol	33.33	27.69
CDY13307	Canola	cytosol	32.41	26.72
CDX67565	Canola	cytosol	32.41	26.72
Zm00001d008420_P001	Maize	cytosol	37.96	17.45
Zm00001d021237_P001	Maize	cytosol	37.04	14.08
Zm00001d033729_P001	Maize	nucleus	46.3	13.66
Zm00001d027753_P001	Maize	nucleus	38.89	9.93
Zm00001d053311_P001	Maize	nucleus	22.22	7.02

Protein Annotations

EnsemblPlants:CDX73181	EnsemblPlantsGene:GSBRNA2T00103670001	GO:A0A078C7Y7	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:CDX73181	ProteinID:CDX73181.1
SEG:seg	UniParc:UPI0004EF289A	MapMan:35.1	:	:	:

Description

BnaC06g36290D

Coordinates

chrLK031797:+:2547975..2548301

Molecular Weight (calculated)

12189.8 Da

IEP (calculated)

7.441

GRAVY (calculated)

-0.240

Length

108 amino acids

Sequence
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVCSEDENGH PLDVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCDEAVF
101: RSLTSMLG

Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR

Arabidopsis Description

At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.