Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039909.1-P | Field mustard | mitochondrion | 99.07 | 99.07 |
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 98.15 | 98.15 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 90.74 | 90.74 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 90.74 | 90.74 |
| AT2G18010.1 | Thale cress | cytosol, plastid | 87.96 | 84.82 |
| CDY24829 | Canola | mitochondrion | 72.22 | 75.0 |
| CDY08909 | Canola | mitochondrion | 71.3 | 74.04 |
| CDY47053 | Canola | mitochondrion, plastid | 66.67 | 72.73 |
| CDX69199 | Canola | mitochondrion, plastid | 69.44 | 72.12 |
| CDX75553 | Canola | mitochondrion, plastid | 69.44 | 72.12 |
| CDX72576 | Canola | mitochondrion | 64.81 | 70.71 |
| CDY70461 | Canola | mitochondrion | 67.59 | 68.22 |
| CDY63257 | Canola | mitochondrion | 67.59 | 68.22 |
| CDX76303 | Canola | mitochondrion | 67.59 | 68.22 |
| CDX75460 | Canola | mitochondrion | 66.67 | 67.29 |
| CDY02251 | Canola | mitochondrion | 66.67 | 66.67 |
| CDX72500 | Canola | mitochondrion | 65.74 | 66.36 |
| CDX69086 | Canola | mitochondrion | 65.74 | 66.36 |
| CDX89731 | Canola | mitochondrion | 65.74 | 65.74 |
| Solyc03g033590.1.1 | Tomato | mitochondrion | 60.19 | 65.66 |
| Solyc02g062230.1.1 | Tomato | cytosol, mitochondrion | 58.33 | 65.62 |
| KRH28787 | Soybean | cytosol, mitochondrion | 62.96 | 65.38 |
| CDY41947 | Canola | mitochondrion | 62.96 | 64.76 |
| PGSC0003DMT400075050 | Potato | cytosol | 57.41 | 64.58 |
| CDY45331 | Canola | mitochondrion | 63.89 | 64.49 |
| CDY22408 | Canola | mitochondrion | 62.04 | 64.42 |
| VIT_04s0023g03230.t01 | Wine grape | mitochondrion | 62.04 | 64.42 |
| CDX72733 | Canola | mitochondrion | 62.04 | 64.42 |
| KRH08093 | Soybean | cytosol | 62.96 | 64.15 |
| PGSC0003DMT400058186 | Potato | cytosol | 59.26 | 64.0 |
| CDY39041 | Canola | mitochondrion | 63.89 | 63.89 |
| CDY13560 | Canola | mitochondrion | 63.89 | 63.89 |
| CDY42589 | Canola | mitochondrion | 62.04 | 63.81 |
| KRH69796 | Soybean | cytosol | 62.96 | 63.55 |
| CDY13831 | Canola | mitochondrion | 61.11 | 63.46 |
| CDX82007 | Canola | mitochondrion | 61.11 | 63.46 |
| CDX68122 | Canola | mitochondrion | 62.96 | 62.96 |
| CDY47511 | Canola | mitochondrion | 62.96 | 62.96 |
| PGSC0003DMT400009439 | Potato | mitochondrion | 58.33 | 62.38 |
| CDX85905 | Canola | mitochondrion | 62.04 | 62.04 |
| CDX73181 | Canola | mitochondrion | 62.04 | 62.04 |
| Solyc02g084010.1.1 | Tomato | mitochondrion | 58.33 | 61.76 |
| CDY44482 | Canola | mitochondrion | 62.04 | 59.29 |
| CDX81404 | Canola | cytosol, mitochondrion, nucleus | 52.78 | 57.0 |
| CDY18596 | Canola | cytosol, mitochondrion, nucleus | 51.85 | 56.0 |
| CDY55152 | Canola | cytosol, mitochondrion | 58.33 | 55.75 |
| CDY29398 | Canola | cytosol, mitochondrion | 56.48 | 53.98 |
| CDY20904 | Canola | cytosol, extracellular | 59.26 | 50.39 |
| KRH76667 | Soybean | cytosol, plastid | 62.96 | 45.03 |
| CDX73741 | Canola | cytosol, mitochondrion, nucleus | 42.59 | 44.66 |
| CDY05061 | Canola | cytosol | 28.7 | 31.63 |
| CDX90724 | Canola | cytosol | 28.7 | 31.63 |
| CDY18466 | Canola | cytosol, mitochondrion | 28.7 | 26.27 |
| CDX70314 | Canola | mitochondrion | 25.0 | 25.23 |
| CDX79712 | Canola | cytosol | 28.7 | 25.0 |
| CDY46750 | Canola | cytosol | 28.7 | 25.0 |
| CDY10388 | Canola | mitochondrion | 24.07 | 24.3 |
| CDX74993 | Canola | cytosol | 27.78 | 24.0 |
| CDX91329 | Canola | cytosol | 27.78 | 24.0 |
| CDY13307 | Canola | cytosol | 28.7 | 23.66 |
| CDX67565 | Canola | cytosol | 28.7 | 23.66 |
| CDY62892 | Canola | mitochondrion | 24.07 | 23.42 |
| CDY44355 | Canola | mitochondrion | 24.07 | 23.42 |
| CDX73568 | Canola | cytosol | 26.85 | 22.31 |
| CDX78160 | Canola | cytosol | 26.85 | 22.31 |
Protein Annotations
| EnsemblPlants:CDY38169 | EnsemblPlantsGene:GSBRNA2T00065473001 | GO:A0A078HLF5 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF41 | PFAM:PF02519 | ProteinID:CDY38169 | ProteinID:CDY38169.1 |
| UniParc:UPI0004EE303A | UniProt:A0A078HLF5 | MapMan:35.1 | : | : | : |
Description
BnaA07g02140DBnaA07g02140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLF5]
Coordinates
chrLK032417:+:269200..269526
Molecular Weight (calculated)
12383.9 Da
IEP (calculated)
8.477
GRAVY (calculated)
-0.374
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIKRSTQAA SIKQILKRCS SLGKKKNVNG CYYNQEDDSF PQDVPKGHFP VYVGPDRSRY IVPISWLGNS EFQTLLRLAE EEFGFEHNMG LSIPCDEVFF
101: KSLISMFR
101: KSLISMFR
001: MAIKRSSKAT SSQAASIKQI VKRCSSLRKM KNVNGCYYNQ EDDLPQDVPK GHFPVYVGPN RSRYIVPISW LHHSEFQTLL RLAEEEFGFD HDMGLTIPCD
101: EVFFRSLISM FR
101: EVFFRSLISM FR
Arabidopsis Description
Putative auxin-regulated protein [Source:UniProtKB/TrEMBL;Acc:Q9SL45]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.