CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013061.1-P	Field mustard	mitochondrion	100.0	100.0
CDX89731	Canola	mitochondrion	96.3	96.3
AT2G16580.1	Thale cress	mitochondrion	92.59	92.59
CDX75460	Canola	mitochondrion	80.56	81.31
CDY70461	Canola	mitochondrion	79.63	80.37
CDX69086	Canola	mitochondrion	79.63	80.37
CDY63257	Canola	mitochondrion	79.63	80.37
CDX72500	Canola	mitochondrion	79.63	80.37
CDX76303	Canola	mitochondrion	79.63	80.37
CDY45331	Canola	mitochondrion	78.7	79.44
CDY47053	Canola	mitochondrion, plastid	62.96	68.69
CDY41947	Canola	mitochondrion	66.67	68.57
VIT_04s0023g03230.t01	Wine grape	mitochondrion	65.74	68.27
CDY22408	Canola	mitochondrion	65.74	68.27
CDY13831	Canola	mitochondrion	65.74	68.27
CDX82007	Canola	mitochondrion	65.74	68.27
CDX72733	Canola	mitochondrion	65.74	68.27
Solyc03g033590.1.1	Tomato	mitochondrion	62.04	67.68
CDY42589	Canola	mitochondrion	65.74	67.62
CDY47511	Canola	mitochondrion	67.59	67.59
KRH28787	Soybean	cytosol, mitochondrion	64.81	67.31
KRH08093	Soybean	cytosol	65.74	66.98
CDX72576	Canola	mitochondrion	61.11	66.67
CDX73181	Canola	mitochondrion	66.67	66.67
CDY30334	Canola	cytosol, mitochondrion, nucleus	66.67	66.67
CDY38169	Canola	cytosol, mitochondrion, nucleus	66.67	66.67
CDY54551	Canola	cytosol, mitochondrion, nucleus	66.67	66.67
KRH69796	Soybean	cytosol	65.74	66.36
PGSC0003DMT400058186	Potato	cytosol	61.11	66.0
CDY68553	Canola	cytosol, mitochondrion, nucleus	65.74	65.74
CDY13560	Canola	mitochondrion	65.74	65.74
CDY39041	Canola	mitochondrion	65.74	65.74
CDX68122	Canola	mitochondrion	65.74	65.74
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	58.33	65.62
CDY24829	Canola	mitochondrion	62.96	65.38
CDY08909	Canola	mitochondrion	62.96	65.38
CDX85905	Canola	mitochondrion	64.81	64.81
PGSC0003DMT400075050	Potato	cytosol	57.41	64.58
CDX69199	Canola	mitochondrion, plastid	61.11	63.46
CDX75553	Canola	mitochondrion, plastid	61.11	63.46
CDY44482	Canola	mitochondrion	64.81	61.95
PGSC0003DMT400009439	Potato	mitochondrion	57.41	61.39
Solyc02g084010.1.1	Tomato	mitochondrion	57.41	60.78
CDX81404	Canola	cytosol, mitochondrion, nucleus	55.56	60.0
CDY18596	Canola	cytosol, mitochondrion, nucleus	54.63	59.0
CDY55152	Canola	cytosol, mitochondrion	61.11	58.41
CDY29398	Canola	cytosol, mitochondrion	59.26	56.64
CDX73741	Canola	cytosol, mitochondrion, nucleus	44.44	46.6
KRH76667	Soybean	cytosol, plastid	64.81	46.36
CDY20904	Canola	cytosol, extracellular	46.3	39.37
CDX90724	Canola	cytosol	30.56	33.67
CDY05061	Canola	cytosol	30.56	33.67
CDY18466	Canola	cytosol, mitochondrion	29.63	27.12
CDX70314	Canola	mitochondrion	26.85	27.1
CDY10388	Canola	mitochondrion	25.93	26.17
CDX74993	Canola	cytosol	29.63	25.6
CDY62892	Canola	mitochondrion	25.93	25.23
CDY44355	Canola	mitochondrion	25.93	25.23
CDY46750	Canola	cytosol	27.78	24.19
CDX79712	Canola	cytosol	27.78	24.19
CDX91329	Canola	cytosol	27.78	24.0
CDX67565	Canola	cytosol	28.7	23.66
CDY13307	Canola	cytosol	28.7	23.66
CDX73568	Canola	cytosol	27.78	23.08
CDX78160	Canola	cytosol	27.78	23.08

Protein Annotations

EnsemblPlants:CDY02251	EnsemblPlantsGene:GSBRNA2T00113672001	GO:A0A078EM08	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:CDY02251	ProteinID:CDY02251.1
SEG:seg	UniParc:UPI0002540AF3	MapMan:35.1	:	:	:

Description

BnaA03g39160D

Coordinates

chrLK031932:+:957139..957465

Molecular Weight (calculated)

12363.1 Da

IEP (calculated)

8.065

GRAVY (calculated)

-0.250

Length

108 amino acids

Sequence
(BLAST)

001: MAILKKSTQL SQTTMLRHIL KRCSSLGKKN GGGGYEEYDL PLDVPKGHFP VYVGKSRSRY IVPISFLTNL DFQCLLRRAE EEFGFDHDMG LTIPCDELFF
101: QDLTSMIR

Best Arabidopsis Sequence Match ( AT2G16580.1 )
(BLAST)

001: MSILKKSTKL AQTAMLRQIL KRCSSLGKKN GGGGYEEVDL PLDVPKGHFP VYVGHNRSRY IVPISFLTNL DFQCLLRRAE EEFGFDHDMG LTIPCDELFF
101: QDLTSMIR

Arabidopsis Description

Putative auxin-induced protein [Source:UniProtKB/TrEMBL;Acc:Q9SI60]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.