Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011560.1-P | Field mustard | mitochondrion | 98.13 | 98.13 |
| CDX75460 | Canola | mitochondrion | 96.26 | 96.26 |
| AT4G34760.1 | Thale cress | mitochondrion | 94.39 | 94.39 |
| CDY70461 | Canola | mitochondrion | 89.72 | 89.72 |
| CDY63257 | Canola | mitochondrion | 89.72 | 89.72 |
| CDX72500 | Canola | mitochondrion | 89.72 | 89.72 |
| CDY45331 | Canola | mitochondrion | 89.72 | 89.72 |
| CDX76303 | Canola | mitochondrion | 89.72 | 89.72 |
| CDX89731 | Canola | mitochondrion | 81.31 | 80.56 |
| CDX72733 | Canola | mitochondrion | 77.57 | 79.81 |
| CDY22408 | Canola | mitochondrion | 77.57 | 79.81 |
| CDY02251 | Canola | mitochondrion | 80.37 | 79.63 |
| CDY41947 | Canola | mitochondrion | 77.57 | 79.05 |
| CDY42589 | Canola | mitochondrion | 76.64 | 78.1 |
| Solyc03g033590.1.1 | Tomato | mitochondrion | 71.03 | 76.77 |
| CDY13831 | Canola | mitochondrion | 73.83 | 75.96 |
| VIT_04s0023g03230.t01 | Wine grape | mitochondrion | 73.83 | 75.96 |
| CDX82007 | Canola | mitochondrion | 73.83 | 75.96 |
| CDY47511 | Canola | mitochondrion | 75.7 | 75.0 |
| CDY39041 | Canola | mitochondrion | 74.77 | 74.07 |
| CDX73181 | Canola | mitochondrion | 74.77 | 74.07 |
| CDY13560 | Canola | mitochondrion | 74.77 | 74.07 |
| KRH28787 | Soybean | cytosol, mitochondrion | 71.96 | 74.04 |
| PGSC0003DMT400058186 | Potato | cytosol | 69.16 | 74.0 |
| CDY47053 | Canola | mitochondrion, plastid | 68.22 | 73.74 |
| KRH08093 | Soybean | cytosol | 72.9 | 73.58 |
| CDX68122 | Canola | mitochondrion | 73.83 | 73.15 |
| Solyc02g062230.1.1 | Tomato | cytosol, mitochondrion | 65.42 | 72.92 |
| KRH69796 | Soybean | cytosol | 72.9 | 72.9 |
| CDX85905 | Canola | mitochondrion | 72.9 | 72.22 |
| CDY08909 | Canola | mitochondrion | 70.09 | 72.12 |
| CDY24829 | Canola | mitochondrion | 70.09 | 72.12 |
| PGSC0003DMT400075050 | Potato | cytosol | 64.49 | 71.88 |
| CDX72576 | Canola | mitochondrion | 66.36 | 71.72 |
| CDX75553 | Canola | mitochondrion, plastid | 68.22 | 70.19 |
| CDX69199 | Canola | mitochondrion, plastid | 68.22 | 70.19 |
| PGSC0003DMT400009439 | Potato | mitochondrion | 63.55 | 67.33 |
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 67.29 | 66.67 |
| Solyc02g084010.1.1 | Tomato | mitochondrion | 63.55 | 66.67 |
| CDY38169 | Canola | cytosol, mitochondrion, nucleus | 66.36 | 65.74 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 66.36 | 65.74 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 66.36 | 65.74 |
| CDY44482 | Canola | mitochondrion | 68.22 | 64.6 |
| CDY55152 | Canola | cytosol, mitochondrion | 66.36 | 62.83 |
| CDY29398 | Canola | cytosol, mitochondrion | 64.49 | 61.06 |
| CDX81404 | Canola | cytosol, mitochondrion, nucleus | 56.07 | 60.0 |
| CDY18596 | Canola | cytosol, mitochondrion, nucleus | 55.14 | 59.0 |
| CDX73741 | Canola | cytosol, mitochondrion, nucleus | 49.53 | 51.46 |
| KRH76667 | Soybean | cytosol, plastid | 70.09 | 49.67 |
| CDY20904 | Canola | cytosol, extracellular | 46.73 | 39.37 |
| CDY05061 | Canola | cytosol | 29.91 | 32.65 |
| CDX90724 | Canola | cytosol | 29.91 | 32.65 |
| CDX79712 | Canola | cytosol | 33.64 | 29.03 |
| CDY46750 | Canola | cytosol | 33.64 | 29.03 |
| CDX70314 | Canola | mitochondrion | 28.97 | 28.97 |
| CDY10388 | Canola | mitochondrion | 28.97 | 28.97 |
| CDY18466 | Canola | cytosol, mitochondrion | 31.78 | 28.81 |
| CDX74993 | Canola | cytosol | 33.64 | 28.8 |
| CDX91329 | Canola | cytosol | 32.71 | 28.0 |
| CDY62892 | Canola | mitochondrion | 28.97 | 27.93 |
| CDY44355 | Canola | mitochondrion | 28.97 | 27.93 |
| CDY13307 | Canola | cytosol | 29.91 | 24.43 |
| CDX67565 | Canola | cytosol | 29.91 | 24.43 |
| CDX73568 | Canola | cytosol | 28.97 | 23.85 |
| CDX78160 | Canola | cytosol | 28.97 | 23.85 |
Protein Annotations
| EnsemblPlants:CDX69086 | EnsemblPlantsGene:GSBRNA2T00130865001 | GO:A0A078BWA1 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF2 | PFAM:PF02519 | ProteinID:CDX69086 | ProteinID:CDX69086.1 |
| UniParc:UPI0004EEC802 | MapMan:35.1 | : | : | : | : |
Description
BnaC01g03670D
Coordinates
chrLK031789:-:2861274..2861951
Molecular Weight (calculated)
12154.8 Da
IEP (calculated)
6.771
GRAVY (calculated)
-0.313
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIMKKSSKL TQTAMLKQIL KRCSSLGKKN GGDYDEECLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQTPLSRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR
101: TLTSMIR
001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR
101: TLTSMIR
Arabidopsis Description
SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.