Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005223.1-P | Field mustard | cytosol | 94.4 | 94.4 |
| CDX74993 | Canola | cytosol | 91.2 | 91.2 |
| CDY46750 | Canola | cytosol | 84.8 | 85.48 |
| CDX79712 | Canola | cytosol | 84.0 | 84.68 |
| CDY18466 | Canola | cytosol, mitochondrion | 79.2 | 83.9 |
| AT2G37030.1 | Thale cress | cytosol | 77.6 | 78.23 |
| CDX78160 | Canola | cytosol | 65.6 | 63.08 |
| CDX73568 | Canola | cytosol | 65.6 | 63.08 |
| CDX67565 | Canola | cytosol | 63.2 | 60.31 |
| CDY13307 | Canola | cytosol | 62.4 | 59.54 |
| PGSC0003DMT400055533 | Potato | cytosol | 53.6 | 55.37 |
| Solyc09g007970.1.1 | Tomato | cytosol | 53.6 | 55.37 |
| KRH19939 | Soybean | cytosol | 53.6 | 54.47 |
| VIT_08s0040g01670.t01 | Wine grape | mitochondrion | 53.6 | 54.03 |
| KRH32539 | Soybean | cytosol | 53.6 | 53.6 |
| CDX70314 | Canola | mitochondrion | 44.8 | 52.34 |
| Solyc10g086200.1.1 | Tomato | cytosol | 51.2 | 52.03 |
| KRH67711 | Soybean | cytosol | 44.0 | 51.89 |
| PGSC0003DMT400080544 | Potato | cytosol | 49.6 | 50.82 |
| CDY10388 | Canola | mitochondrion | 43.2 | 50.47 |
| KRG95997 | Soybean | mitochondrion | 48.8 | 48.8 |
| CDY62892 | Canola | mitochondrion | 41.6 | 46.85 |
| CDY44355 | Canola | mitochondrion | 40.8 | 45.95 |
| OQU81983 | Sorghum | mitochondrion | 39.2 | 38.89 |
| Zm00001d003018_P001 | Maize | mitochondrion | 38.4 | 37.8 |
| CDX72733 | Canola | mitochondrion | 30.4 | 36.54 |
| CDY22408 | Canola | mitochondrion | 30.4 | 36.54 |
| CDY41947 | Canola | mitochondrion | 30.4 | 36.19 |
| CDX68122 | Canola | mitochondrion | 31.2 | 36.11 |
| CDY47511 | Canola | mitochondrion | 31.2 | 36.11 |
| CDX85905 | Canola | mitochondrion | 31.2 | 36.11 |
| CDX73181 | Canola | mitochondrion | 31.2 | 36.11 |
| CDY42589 | Canola | mitochondrion | 29.6 | 35.24 |
| CDY13560 | Canola | mitochondrion | 30.4 | 35.19 |
| CDY39041 | Canola | mitochondrion | 30.4 | 35.19 |
| CDY13831 | Canola | mitochondrion | 28.8 | 34.62 |
| CDX82007 | Canola | mitochondrion | 28.8 | 34.62 |
| CDY18596 | Canola | cytosol, mitochondrion, nucleus | 27.2 | 34.0 |
| CDX75460 | Canola | mitochondrion | 28.8 | 33.64 |
| Os04t0517900-01 | Rice | mitochondrion | 34.4 | 33.33 |
| CDX81404 | Canola | cytosol, mitochondrion, nucleus | 26.4 | 33.0 |
| CDY55152 | Canola | cytosol, mitochondrion | 29.6 | 32.74 |
| CDX69086 | Canola | mitochondrion | 28.0 | 32.71 |
| CDY47053 | Canola | mitochondrion, plastid | 25.6 | 32.32 |
| CDX72576 | Canola | mitochondrion | 25.6 | 32.32 |
| CDY44482 | Canola | mitochondrion | 28.8 | 31.86 |
| CDY29398 | Canola | cytosol, mitochondrion | 28.8 | 31.86 |
| CDX72500 | Canola | mitochondrion | 27.2 | 31.78 |
| CDX69199 | Canola | mitochondrion, plastid | 26.4 | 31.73 |
| CDX75553 | Canola | mitochondrion, plastid | 26.4 | 31.73 |
| CDX73741 | Canola | cytosol, mitochondrion, nucleus | 25.6 | 31.07 |
| CDX76303 | Canola | mitochondrion | 26.4 | 30.84 |
| CDY70461 | Canola | mitochondrion | 26.4 | 30.84 |
| CDY63257 | Canola | mitochondrion | 26.4 | 30.84 |
| CDY45331 | Canola | mitochondrion | 26.4 | 30.84 |
| CDY08909 | Canola | mitochondrion | 25.6 | 30.77 |
| CDY24829 | Canola | mitochondrion | 25.6 | 30.77 |
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 24.8 | 28.7 |
| CDX89731 | Canola | mitochondrion | 24.8 | 28.7 |
| TraesCS2A01G381300.1 | Wheat | plastid | 34.4 | 27.92 |
| TraesCS2B01G398600.1 | Wheat | cytosol, plastid | 33.6 | 27.81 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 24.0 | 27.78 |
| CDY38169 | Canola | cytosol, mitochondrion, nucleus | 24.0 | 27.78 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 24.0 | 27.78 |
| CDY02251 | Canola | mitochondrion | 24.0 | 27.78 |
| CDX90724 | Canola | cytosol | 21.6 | 27.55 |
| CDY05061 | Canola | cytosol | 21.6 | 27.55 |
| HORVU2Hr1G089400.1 | Barley | plastid | 34.4 | 27.39 |
| TraesCS2D01G377800.1 | Wheat | plastid | 32.8 | 26.45 |
| GSMUA_Achr1P09150_001 | Banana | nucleus | 35.2 | 23.04 |
| CDY20904 | Canola | cytosol, extracellular | 23.2 | 22.83 |
Protein Annotations
| EnsemblPlants:CDX91329 | EnsemblPlantsGene:GSBRNA2T00152605001 | GO:A0A078DS29 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF9 | PFAM:PF02519 | ProteinID:CDX91329 | ProteinID:CDX91329.1 |
| UniParc:UPI0004EE96B9 | MapMan:35.2 | : | : | : | : |
Description
BnaC04g08210D
Coordinates
chrLK031867:+:25069..25446
Molecular Weight (calculated)
13922.1 Da
IEP (calculated)
8.419
GRAVY (calculated)
0.042
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSKFIKSCE KKLKVMTSKV TTPCTFCETC CQGFCLAFKK EAEMIPKDVP KGHLVVYVGE ESRRFVIKIT LLTHPLFKAL LDQAQDAYGF NSADSRLWIP
101: CDVSTFLNVA RCAGAPQGQS NCMCI
101: CDVSTFLNVA RCAGAPQGQS NCMCI
001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI
101: NESTFLDVVR CAGAPQHQNN CICI
Arabidopsis Description
Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.