Factsheet for Os04t0517900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 7
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU81983	Sorghum	mitochondrion	72.09	73.81
Zm00001d003018_P001	Maize	mitochondrion	68.22	69.29
TraesCS2B01G398600.1	Wheat	cytosol, plastid	72.09	61.59
HORVU2Hr1G089400.1	Barley	plastid	74.42	61.15
TraesCS2A01G381300.1	Wheat	plastid	71.32	59.74
TraesCS2D01G377800.1	Wheat	plastid	70.54	58.71
KRH19939	Soybean	cytosol	45.74	47.97
KRH32539	Soybean	cytosol	44.19	45.6
VIT_08s0040g01670.t01	Wine grape	mitochondrion	41.09	42.74
KRH67711	Soybean	cytosol	34.88	42.45
Os02t0445600-01	Rice	cytosol, mitochondrion	31.78	42.27
KRG95997	Soybean	mitochondrion	40.31	41.6
Solyc09g007970.1.1	Tomato	cytosol	37.98	40.5
PGSC0003DMT400055533	Potato	cytosol	37.98	40.5
Bra017211.1-P	Field mustard	mitochondrion	36.43	39.83
CDY18466	Canola	cytosol, mitochondrion	36.43	39.83
AT2G37030.1	Thale cress	cytosol	37.21	38.71
Os02t0445100-01	Rice	mitochondrion	28.68	38.54
CDY10388	Canola	mitochondrion	31.78	38.32
CDX70314	Canola	mitochondrion	31.78	38.32
Bra009535.1-P	Field mustard	mitochondrion	31.78	38.32
Os06t0137400-00	Rice	mitochondrion	34.88	37.82
CDY46750	Canola	cytosol	35.66	37.1
Bra023093.1-P	Field mustard	cytosol	35.66	37.1
CDY62892	Canola	mitochondrion	31.78	36.94
Bra028841.1-P	Field mustard	mitochondrion	31.78	36.94
PGSC0003DMT400080544	Potato	cytosol	34.88	36.89
CDX79712	Canola	cytosol	34.88	36.29
CDY44355	Canola	mitochondrion	31.01	36.04
CDX74993	Canola	cytosol	34.88	36.0
Solyc10g086200.1.1	Tomato	cytosol	34.11	35.77
AT5G03310.1	Thale cress	mitochondrion	31.01	35.09
KRH34853	Soybean	mitochondrion	31.78	34.75
Bra005223.1-P	Field mustard	cytosol	33.33	34.4
CDX91329	Canola	cytosol	33.33	34.4
CDX78160	Canola	cytosol	34.11	33.85
Bra006984.1-P	Field mustard	cytosol	34.11	33.85
CDX73568	Canola	cytosol	33.33	33.08
CDX67565	Canola	cytosol	32.56	32.06
Bra003125.1-P	Field mustard	cytosol	32.56	32.06
KRG91926	Soybean	mitochondrion	31.01	32.0
CDY13307	Canola	cytosol	31.78	31.3
GSMUA_Achr1P09150_001	Banana	nucleus	41.86	28.27
AT3G53250.2	Thale cress	endoplasmic reticulum, extracellular	31.78	26.45

Protein Annotations

EMBL:AK241307	EnsemblPlants:Os04t0517900-01	EnsemblPlantsGene:Os04g0517900	EntrezGene:9271447	GO:GO:0008150	GO:GO:0009719
GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	ProteinID:BAH92744.1
ProteinID:BAS90100.1	ProteinID:CAE05452.3	RefSeq:XP_015635333.1	SEG:seg	UniParc:UPI00001B208F	UniProt:Q7X7G3
MapMan:35.2	:	:	:	:	:

Description

SMALL AUXIN-UP RNA 18Auxin responsive SAUR protein family protein. (Os04t0517900-01)

Coordinates

chr4:+:25896740..25897489

Molecular Weight (calculated)

14273.1 Da

IEP (calculated)

7.507

GRAVY (calculated)

-0.200

Length

129 amino acids

Sequence
(BLAST)

001: MKGGGSKRRL LRAFLHSWKK LGAAAAAAAP AAGEWAPLDG DGEGAIPSDV PRGHTVVYVG EELRRYVVRV SSLDHPLFRE LLDRAREEYQ FAAGADARLC
101: IPCDEDIFLG VLCHVDSKQE HWRLISFCR

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.