Factsheet for Bra003125.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67565	Canola	cytosol	99.24	99.24
CDY13307	Canola	cytosol	98.47	98.47
Bra006984.1-P	Field mustard	cytosol	90.08	90.77
Bra005223.1-P	Field mustard	cytosol	61.83	64.8
Bra017211.1-P	Field mustard	mitochondrion	58.02	64.41
Bra023093.1-P	Field mustard	cytosol	59.54	62.9
PGSC0003DMT400055533	Potato	cytosol	51.91	56.2
Solyc09g007970.1.1	Tomato	cytosol	51.91	56.2
PGSC0003DMT400080544	Potato	cytosol	51.91	55.74
Solyc10g086200.1.1	Tomato	cytosol	51.91	55.28
VIT_08s0040g01670.t01	Wine grape	mitochondrion	51.15	54.03
KRH19939	Soybean	cytosol	50.38	53.66
KRH32539	Soybean	cytosol	49.62	52.0
KRH67711	Soybean	cytosol	40.46	50.0
Bra009535.1-P	Field mustard	mitochondrion	40.46	49.53
KRG95997	Soybean	mitochondrion	45.8	48.0
Bra028841.1-P	Field mustard	mitochondrion	38.93	45.95
OQU81983	Sorghum	mitochondrion	34.35	35.71
Zm00001d003018_P001	Maize	mitochondrion	33.59	34.65
Bra017747.1-P	Field mustard	mitochondrion, plastid	25.19	33.33
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	25.19	33.0
Bra008207.1-P	Field mustard	cytosol, mitochondrion	23.66	32.63
Os04t0517900-01	Rice	mitochondrion	32.06	32.56
Bra003746.1-P	Field mustard	mitochondrion	26.72	32.41
Bra015832.1-P	Field mustard	mitochondrion	26.72	32.41
Bra011560.1-P	Field mustard	mitochondrion	25.95	31.78
Bra010501.1-P	Field mustard	mitochondrion	25.19	31.73
Bra034651.1-P	Field mustard	mitochondrion	25.19	31.73
Bra011662.1-P	Field mustard	mitochondrion, plastid	25.19	31.73
Bra033581.1-P	Field mustard	mitochondrion	24.43	30.77
Bra031171.1-P	Field mustard	mitochondrion	24.43	30.77
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	24.43	30.48
Bra011889.1-P	Field mustard	mitochondrion	24.43	30.48
Bra025770.1-P	Field mustard	cytosol, mitochondrion	25.19	29.2
Bra017676.1-P	Field mustard	mitochondrion	23.66	28.97
Bra039909.1-P	Field mustard	mitochondrion	23.66	28.7
Bra013061.1-P	Field mustard	mitochondrion	23.66	28.7
Bra024482.1-P	Field mustard	mitochondrion	23.66	28.7
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	22.9	27.78
Bra000682.1-P	Field mustard	cytosol	19.85	26.53
TraesCS2B01G398600.1	Wheat	cytosol, plastid	27.48	23.84
TraesCS2A01G381300.1	Wheat	plastid	27.48	23.38
HORVU2Hr1G089400.1	Barley	plastid	27.48	22.93
TraesCS2D01G377800.1	Wheat	plastid	26.72	22.58
GSMUA_Achr1P09150_001	Banana	nucleus	32.06	21.99

Protein Annotations

EnsemblPlants:Bra003125.1	EnsemblPlants:Bra003125.1-P	EnsemblPlantsGene:Bra003125	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	PFscan:PS51257	UniParc:UPI0002541350
UniProt:M4CFZ3	MapMan:35.2	:	:	:	:

Description

AT3G53250 (E=2e-052) | auxin-responsive family protein

Coordinates

chrA07:+:11473811..11474206

Molecular Weight (calculated)

15191.5 Da

IEP (calculated)

8.561

GRAVY (calculated)

-0.292

Length

131 amino acids

Sequence
(BLAST)

001: MKNKFIKACE NKFKTMKSKS IVIQCCTSFS CESCYEKVSW GFKKENEAIP KDVPKGHLVV YVGDDYKRFV IKMSLLKHPI FKALLDLAQD AYDFSSDSSR
101: LWIPCDENTF LDVVRCSGAP QQQRNCIYMY M

Best Arabidopsis Sequence Match ( AT3G53250.2 )
(BLAST)

001: MYFTIVLLIT KPSLSLFYSS FIFETSHSIL KMKNKFIKSC ENKFRIMKSK SIVLPCCTSS CESCCDKVSW GFKKENEAIP KDVPRGHLVV YVGDDYKRFV
101: IKMSLLTHPI FKALLDQAQD AYNSSRLWIP CDENTFLDVV RCSGAPQHQR NCIGM

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQF0]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.