Factsheet for Bra010501.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000872.1-P
Bra018539.1-P
Bra036256.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36110.1	Bra000872.1-P	AT4G02590.1	21798944
AT4G36110.1	Bra018539.1-P	AT4G02590.1	21798944
AT4G36110.1	Bra036256.1-P	AT4G02590.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24829	Canola	mitochondrion	100.0	100.0
CDY08909	Canola	mitochondrion	99.04	99.04
Bra017747.1-P	Field mustard	mitochondrion, plastid	87.5	91.92
AT4G36110.1	Thale cress	mitochondrion	90.38	90.38
Bra011662.1-P	Field mustard	mitochondrion, plastid	90.38	90.38
Bra039909.1-P	Field mustard	mitochondrion	75.0	72.22
VIT_04s0023g03230.t01	Wine grape	mitochondrion	72.12	72.12
Bra034651.1-P	Field mustard	mitochondrion	72.12	72.12
Solyc03g033590.1.1	Tomato	mitochondrion	68.27	71.72
Bra011560.1-P	Field mustard	mitochondrion	73.08	71.03
Bra024482.1-P	Field mustard	mitochondrion	73.08	70.37
PGSC0003DMT400058186	Potato	cytosol	67.31	70.0
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	64.42	69.79
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	72.12	69.44
KRH28787	Soybean	cytosol, mitochondrion	69.23	69.23
PGSC0003DMT400075050	Potato	cytosol	63.46	68.75
Bra011889.1-P	Field mustard	mitochondrion	69.23	68.57
Bra008207.1-P	Field mustard	cytosol, mitochondrion	61.54	67.37
KRH08093	Soybean	cytosol	68.27	66.98
Bra017676.1-P	Field mustard	mitochondrion	68.27	66.36
KRH69796	Soybean	cytosol	68.27	66.36
Bra033581.1-P	Field mustard	mitochondrion	66.35	66.35
Bra015832.1-P	Field mustard	mitochondrion	68.27	65.74
Bra003746.1-P	Field mustard	mitochondrion	68.27	65.74
Bra031171.1-P	Field mustard	mitochondrion	65.38	65.38
PGSC0003DMT400009439	Potato	mitochondrion	62.5	64.36
Solyc02g084010.1.1	Tomato	mitochondrion	62.5	63.73
Bra013061.1-P	Field mustard	mitochondrion	65.38	62.96
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	56.73	59.0
Bra025770.1-P	Field mustard	cytosol, mitochondrion	60.58	55.75
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	50.96	50.48
KRH76667	Soybean	cytosol, plastid	68.27	47.02
Bra000682.1-P	Field mustard	cytosol	30.77	32.65
Bra017211.1-P	Field mustard	mitochondrion	31.73	27.97
Bra023093.1-P	Field mustard	cytosol	31.73	26.61
Bra009535.1-P	Field mustard	mitochondrion	26.92	26.17
Bra005223.1-P	Field mustard	cytosol	30.77	25.6
Bra003125.1-P	Field mustard	cytosol	31.73	25.19
Bra028841.1-P	Field mustard	mitochondrion	25.96	24.32
Bra006984.1-P	Field mustard	cytosol	29.81	23.85

Protein Annotations

EnsemblPlants:Bra010501.1	EnsemblPlants:Bra010501.1-P	EnsemblPlantsGene:Bra010501	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF41	PFAM:PF02519	UniParc:UPI0002545C3D	UniProt:M4D201
MapMan:35.1	:	:	:	:	:

Description

AT4G36110 (E=1e-051) | auxin-responsive protein, putative

Coordinates

chrA08:-:14854031..14854345

Molecular Weight (calculated)

11853.3 Da

IEP (calculated)

8.865

GRAVY (calculated)

-0.262

Length

104 amino acids

Sequence
(BLAST)

001: MALKKSNKVA ASQAASLKKI LKRCSSLGKK NQSNCYFNDV PKGHFPVYVG QQRSRYVVPI SWLDHPEFQT LLQLAEEEFG FEHDMGLTIP CDEVVFQSLI
101: SMFR

Best Arabidopsis Sequence Match ( AT4G36110.1 )
(BLAST)

001: MAIKKSNKAA LSQAASLKQI LKRCSSLGKK NQGNCYFNDV PKGHFPVYVG QHRSRYVVPI SWLDHHEFQS LLQLAEEEFG FEHEMGLTIP CDEVVFRSLI
101: SMFR

Arabidopsis Description

SAUR9 [Source:UniProtKB/TrEMBL;Acc:A0A178V0P2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.