Factsheet for Bra017747.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000872.1-P
Bra018539.1-P
Bra036256.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36110.1	Bra000872.1-P	AT4G02590.1	21798944
AT4G36110.1	Bra018539.1-P	AT4G02590.1	21798944
AT4G36110.1	Bra036256.1-P	AT4G02590.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47053	Canola	mitochondrion, plastid	98.99	98.99
CDX72576	Canola	mitochondrion	96.97	96.97
Bra010501.1-P	Field mustard	mitochondrion	91.92	87.5
AT4G36110.1	Thale cress	mitochondrion	87.88	83.65
Bra011662.1-P	Field mustard	mitochondrion, plastid	87.88	83.65
Bra034651.1-P	Field mustard	mitochondrion	74.75	71.15
VIT_04s0023g03230.t01	Wine grape	mitochondrion	73.74	70.19
Bra011560.1-P	Field mustard	mitochondrion	74.75	69.16
PGSC0003DMT400058186	Potato	cytosol	69.7	69.0
Solyc03g033590.1.1	Tomato	mitochondrion	68.69	68.69
PGSC0003DMT400075050	Potato	cytosol	65.66	67.71
KRH28787	Soybean	cytosol, mitochondrion	70.71	67.31
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	64.65	66.67
Bra011889.1-P	Field mustard	mitochondrion	70.71	66.67
Bra039909.1-P	Field mustard	mitochondrion	72.73	66.67
Bra017676.1-P	Field mustard	mitochondrion	71.72	66.36
Bra031171.1-P	Field mustard	mitochondrion	69.7	66.35
Bra008207.1-P	Field mustard	cytosol, mitochondrion	63.64	66.32
KRH08093	Soybean	cytosol	70.71	66.04
KRH69796	Soybean	cytosol	70.71	65.42
Bra024482.1-P	Field mustard	mitochondrion	70.71	64.81
Bra003746.1-P	Field mustard	mitochondrion	70.71	64.81
Bra015832.1-P	Field mustard	mitochondrion	70.71	64.81
Bra033581.1-P	Field mustard	mitochondrion	67.68	64.42
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	69.7	63.89
Bra013061.1-P	Field mustard	mitochondrion	68.69	62.96
PGSC0003DMT400009439	Potato	mitochondrion	63.64	62.38
Solyc02g084010.1.1	Tomato	mitochondrion	63.64	61.76
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	59.6	59.0
Bra025770.1-P	Field mustard	cytosol, mitochondrion	59.6	52.21
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	53.54	50.48
KRH76667	Soybean	cytosol, plastid	70.71	46.36
Bra000682.1-P	Field mustard	cytosol	32.32	32.65
Bra017211.1-P	Field mustard	mitochondrion	34.34	28.81
Bra023093.1-P	Field mustard	cytosol	33.33	26.61
Bra009535.1-P	Field mustard	mitochondrion	28.28	26.17
Bra005223.1-P	Field mustard	cytosol	32.32	25.6
Bra003125.1-P	Field mustard	cytosol	33.33	25.19
Bra028841.1-P	Field mustard	mitochondrion	27.27	24.32
Bra006984.1-P	Field mustard	cytosol	31.31	23.85

Protein Annotations

EnsemblPlants:Bra017747.1	EnsemblPlants:Bra017747.1-P	EnsemblPlantsGene:Bra017747	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF41	PFAM:PF02519	UniParc:UPI0002540BD8	UniProt:M4DML2
MapMan:35.1	:	:	:	:	:

Description

AT4G36110 (E=1e-044) | auxin-responsive protein, putative

Coordinates

chrA03:+:30181005..30181304

Molecular Weight (calculated)

11164.6 Da

IEP (calculated)

8.865

GRAVY (calculated)

-0.170

Length

99 amino acids

Sequence
(BLAST)

1: MVTKKSNKVS ACQAASLKKI LKRCSSLGKK NQGNDVPKGH FPVYVGQYRS RYVVPISWLA HPEFQSLLQL AEEEFGFEHD MGLTIPCDEV VFQSLISMF

Best Arabidopsis Sequence Match ( AT4G36110.1 )
(BLAST)

001: MAIKKSNKAA LSQAASLKQI LKRCSSLGKK NQGNCYFNDV PKGHFPVYVG QHRSRYVVPI SWLDHHEFQS LLQLAEEEFG FEHEMGLTIP CDEVVFRSLI
101: SMFR

Arabidopsis Description

SAUR9 [Source:UniProtKB/TrEMBL;Acc:A0A178V0P2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.