Factsheet for Bra033581.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72733	Canola	mitochondrion	100.0	100.0
CDY22408	Canola	mitochondrion	100.0	100.0
Bra011889.1-P	Field mustard	mitochondrion	96.15	95.24
AT4G38860.1	Thale cress	mitochondrion	94.23	93.33
Bra031171.1-P	Field mustard	mitochondrion	81.73	81.73
Bra011560.1-P	Field mustard	mitochondrion	80.77	78.5
Bra034651.1-P	Field mustard	mitochondrion	77.88	77.88
VIT_04s0023g03230.t01	Wine grape	mitochondrion	75.96	75.96
KRH28787	Soybean	cytosol, mitochondrion	75.0	75.0
Bra008207.1-P	Field mustard	cytosol, mitochondrion	68.27	74.74
Bra003746.1-P	Field mustard	mitochondrion	76.92	74.07
Bra017676.1-P	Field mustard	mitochondrion	75.96	73.83
KRH08093	Soybean	cytosol	74.04	72.64
Bra015832.1-P	Field mustard	mitochondrion	75.0	72.22
KRH69796	Soybean	cytosol	74.04	71.96
Solyc03g033590.1.1	Tomato	mitochondrion	67.31	70.71
PGSC0003DMT400058186	Potato	cytosol	66.35	69.0
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	62.5	67.71
PGSC0003DMT400075050	Potato	cytosol	62.5	67.71
Bra017747.1-P	Field mustard	mitochondrion, plastid	64.42	67.68
Bra010501.1-P	Field mustard	mitochondrion	66.35	66.35
Bra013061.1-P	Field mustard	mitochondrion	68.27	65.74
PGSC0003DMT400009439	Potato	mitochondrion	63.46	65.35
Solyc02g084010.1.1	Tomato	mitochondrion	63.46	64.71
Bra011662.1-P	Field mustard	mitochondrion, plastid	63.46	63.46
Bra039909.1-P	Field mustard	mitochondrion	64.42	62.04
Bra025770.1-P	Field mustard	cytosol, mitochondrion	66.35	61.06
Bra024482.1-P	Field mustard	mitochondrion	62.5	60.19
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	62.5	60.19
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	53.85	56.0
KRH76667	Soybean	cytosol, plastid	72.12	49.67
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	50.0	49.52
Bra000682.1-P	Field mustard	cytosol	29.81	31.63
Bra009535.1-P	Field mustard	mitochondrion	31.73	30.84
Bra023093.1-P	Field mustard	cytosol	35.58	29.84
Bra028841.1-P	Field mustard	mitochondrion	31.73	29.73
Bra017211.1-P	Field mustard	mitochondrion	33.65	29.66
Bra005223.1-P	Field mustard	cytosol	35.58	29.6
Bra006984.1-P	Field mustard	cytosol	30.77	24.62
Bra003125.1-P	Field mustard	cytosol	30.77	24.43

Protein Annotations

EnsemblPlants:Bra033581.1	EnsemblPlants:Bra033581.1-P	EnsemblPlantsGene:Bra033581	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	UniParc:UPI000253F8F7	UniProt:M4EXP4
MapMan:35.1	:	:	:	:	:

Description

AT4G38860 (E=5e-052) | auxin-responsive protein, putative

Coordinates

chrA06:-:26125542..26125856

Molecular Weight (calculated)

11826.6 Da

IEP (calculated)

8.082

GRAVY (calculated)

-0.065

Length

104 amino acids

Sequence
(BLAST)

001: MAAKRSSKLT QTAMLKQIIK RCSSLGKKQC YDEEGLPLDV PKGHFPVYVG ENRTRYIVPI TFLSHPEFLI LLQQAEEEFG FHHMGGLTIP CEEVVFLSLT
101: SMIR

Best Arabidopsis Sequence Match ( AT4G38860.1 )
(BLAST)

001: MAVKRSSKLT QTAMLKQILK RCSSLGKKQC YDEEGLPLDV PKGHFPVYVG EKRTRYIVPI SFLTHPEFLI LLQQAEEEFG FRHDMGGLTI PCEEVVFLSL
101: TSMIR

Arabidopsis Description

At4g38860 [Source:UniProtKB/TrEMBL;Acc:Q9T0J3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.