Factsheet for Bra036830.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73741	Canola	cytosol, mitochondrion, nucleus	96.19	98.06
AT3G51200.1	Thale cress	nucleus	62.86	62.26
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	55.24	58.0
Bra017747.1-P	Field mustard	mitochondrion, plastid	50.48	53.54
Bra011560.1-P	Field mustard	mitochondrion	53.33	52.34
Bra011662.1-P	Field mustard	mitochondrion, plastid	51.43	51.92
Bra017676.1-P	Field mustard	mitochondrion	52.38	51.4
Bra010501.1-P	Field mustard	mitochondrion	50.48	50.96
Bra034651.1-P	Field mustard	mitochondrion	50.48	50.96
Bra011889.1-P	Field mustard	mitochondrion	50.48	50.48
Bra033581.1-P	Field mustard	mitochondrion	49.52	50.0
Bra003746.1-P	Field mustard	mitochondrion	50.48	49.07
Bra015832.1-P	Field mustard	mitochondrion	49.52	48.15
Bra031171.1-P	Field mustard	mitochondrion	47.62	48.08
Bra008207.1-P	Field mustard	cytosol, mitochondrion	42.86	47.37
Bra013061.1-P	Field mustard	mitochondrion	47.62	46.3
Bra039909.1-P	Field mustard	mitochondrion	45.71	44.44
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	44.76	43.52
Bra024482.1-P	Field mustard	mitochondrion	44.76	43.52
Bra025770.1-P	Field mustard	cytosol, mitochondrion	41.9	38.94
Bra000682.1-P	Field mustard	cytosol	25.71	27.55
Bra005223.1-P	Field mustard	cytosol	32.38	27.2
Bra017211.1-P	Field mustard	mitochondrion	30.48	27.12
Bra009535.1-P	Field mustard	mitochondrion	27.62	27.1
Bra023093.1-P	Field mustard	cytosol	31.43	26.61
Bra028841.1-P	Field mustard	mitochondrion	27.62	26.13
Bra003125.1-P	Field mustard	cytosol	30.48	24.43
Bra006984.1-P	Field mustard	cytosol	29.52	23.85

Protein Annotations

EnsemblPlants:Bra036830.1	EnsemblPlants:Bra036830.1-P	EnsemblPlantsGene:Bra036830	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF35	PFAM:PF02519	UniParc:UPI0002542C68	UniProt:M4F6X0
MapMan:35.1	:	:	:	:	:

Description

AT3G51200 (E=2e-031) | auxin-responsive family protein

Coordinates

chrA09:-:25560868..25561185

Molecular Weight (calculated)

11948.9 Da

IEP (calculated)

10.486

GRAVY (calculated)

-0.132

Length

105 amino acids

Sequence
(BLAST)

001: MGIKIASKAQ TEKVAAPLKQ MLKRCSSLLK KGKEEVPRKG HFAVYVGQSR SRHVIPITLL NHPIFQMMLH EAEKEFGFRQ ERGITIPCDQ NIFLFLLDII
101: SNLTS

Best Arabidopsis Sequence Match ( AT3G51200.1 )
(BLAST)

001: MEIKEASKTQ RERRGASSLK QMLMKRCSSF VKKSNEEDVP KKGYFAVYVG HFRDRHVIPI TSLNHPTFKM MLQKSEEEFG FRQESGLTIP CDQNTFLTLL
101: DSITSY

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9SD26]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.