Factsheet for Bra028841.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62892	Canola	mitochondrion	100.0	100.0
CDY44355	Canola	mitochondrion	98.2	98.2
Bra009535.1-P	Field mustard	mitochondrion	83.78	86.92
AT5G03310.1	Thale cress	mitochondrion	82.88	80.7
KRH67711	Soybean	cytosol	48.65	50.94
KRG95997	Soybean	mitochondrion	52.25	46.4
KRH19939	Soybean	cytosol	50.45	45.53
VIT_08s0040g01670.t01	Wine grape	mitochondrion	50.45	45.16
KRH32539	Soybean	cytosol	50.45	44.8
Solyc09g007970.1.1	Tomato	cytosol	47.75	43.8
Bra017211.1-P	Field mustard	mitochondrion	45.95	43.22
PGSC0003DMT400055533	Potato	cytosol	46.85	42.98
Bra023093.1-P	Field mustard	cytosol	47.75	42.74
Bra005223.1-P	Field mustard	cytosol	46.85	41.6
Solyc10g086200.1.1	Tomato	cytosol	44.14	39.84
Bra003125.1-P	Field mustard	cytosol	45.95	38.93
Bra006984.1-P	Field mustard	cytosol	45.05	38.46
PGSC0003DMT400080544	Potato	cytosol	41.44	37.7
Bra008207.1-P	Field mustard	cytosol, mitochondrion	27.93	32.63
Os04t0517900-01	Rice	mitochondrion	36.94	31.78
OQU81983	Sorghum	mitochondrion	36.04	31.75
Bra033581.1-P	Field mustard	mitochondrion	29.73	31.73
Bra015832.1-P	Field mustard	mitochondrion	30.63	31.48
Bra003746.1-P	Field mustard	mitochondrion	30.63	31.48
Bra037178.1-P	Field mustard	cytosol, mitochondrion, nucleus	27.93	31.0
Bra011889.1-P	Field mustard	mitochondrion	28.83	30.48
Zm00001d003018_P001	Maize	mitochondrion	34.23	29.92
Bra011560.1-P	Field mustard	mitochondrion	28.83	29.91
Bra031171.1-P	Field mustard	mitochondrion	27.03	28.85
Bra036830.1-P	Field mustard	cytosol, mitochondrion, nucleus	26.13	27.62
Bra017747.1-P	Field mustard	mitochondrion, plastid	24.32	27.27
Bra017676.1-P	Field mustard	mitochondrion	26.13	27.1
Bra034651.1-P	Field mustard	mitochondrion	25.23	26.92
Bra011662.1-P	Field mustard	mitochondrion, plastid	25.23	26.92
Bra025770.1-P	Field mustard	cytosol, mitochondrion	27.03	26.55
Bra010501.1-P	Field mustard	mitochondrion	24.32	25.96
Bra024482.1-P	Field mustard	mitochondrion	25.23	25.93
Bra013061.1-P	Field mustard	mitochondrion	25.23	25.93
Bra039909.1-P	Field mustard	mitochondrion	23.42	24.07
Bra037243.1-P	Field mustard	cytosol, mitochondrion, nucleus	23.42	24.07
TraesCS2D01G377800.1	Wheat	plastid	33.33	23.87
TraesCS2B01G398600.1	Wheat	cytosol, plastid	32.43	23.84
TraesCS2A01G381300.1	Wheat	plastid	32.43	23.38
HORVU2Hr1G089400.1	Barley	plastid	32.43	22.93
GSMUA_Achr1P09150_001	Banana	nucleus	37.84	21.99
Bra000682.1-P	Field mustard	cytosol	18.92	21.43

Protein Annotations

EnsemblPlants:Bra028841.1	EnsemblPlants:Bra028841.1-P	EnsemblPlantsGene:Bra028841	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	UniParc:UPI00025436B4	UniProt:M4EJ75
MapMan:35.2	:	:	:	:	:

Description

AT5G03310 (E=1e-048) | auxin-responsive family protein

Coordinates

chrA02:-:1787708..1788043

Molecular Weight (calculated)

12707.3 Da

IEP (calculated)

8.249

GRAVY (calculated)

-0.466

Length

111 amino acids

Sequence
(BLAST)

001: MMKKSKLITK AWKHMSTRVA KHKAAGEEPH IPHDVPKGHL VVYVGKEEES YKRFVIKITL LHDPIIRALL DQSKDEVYDD FTSGDSKLCI SCDETLFLEV
101: LQNASPRNSW S

Best Arabidopsis Sequence Match ( AT5G03310.1 )
(BLAST)

001: MMKKSKLIAK AWKQMSSRVA KHRVATGNPK DQYHIPHDVP KGHLVVYVGK DEETYKRFVI KITLLHDPIF RALLDQSKDE AYDDFTSGDS KLCIACDETL
101: FLEVLRCASP RYSL

Arabidopsis Description

Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 [Source:UniProtKB/TrEMBL;Acc:Q9LZF9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.