Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81983 | Sorghum | mitochondrion | 87.4 | 88.1 |
| Os04t0517900-01 | Rice | mitochondrion | 69.29 | 68.22 |
| TraesCS2B01G398600.1 | Wheat | cytosol, plastid | 64.57 | 54.3 |
| HORVU2Hr1G089400.1 | Barley | plastid | 66.93 | 54.14 |
| TraesCS2A01G381300.1 | Wheat | plastid | 65.35 | 53.9 |
| TraesCS2D01G377800.1 | Wheat | plastid | 63.78 | 52.26 |
| KRH19939 | Soybean | cytosol | 41.73 | 43.09 |
| VIT_08s0040g01670.t01 | Wine grape | mitochondrion | 41.73 | 42.74 |
| KRH32539 | Soybean | cytosol | 40.16 | 40.8 |
| KRH67711 | Soybean | cytosol | 33.86 | 40.57 |
| AT2G37030.1 | Thale cress | cytosol | 38.58 | 39.52 |
| Bra017211.1-P | Field mustard | mitochondrion | 36.22 | 38.98 |
| CDY18466 | Canola | cytosol, mitochondrion | 36.22 | 38.98 |
| CDY46750 | Canola | cytosol | 37.8 | 38.71 |
| Bra023093.1-P | Field mustard | cytosol | 37.8 | 38.71 |
| CDX91329 | Canola | cytosol | 37.8 | 38.4 |
| Zm00001d051802_P001 | Maize | mitochondrion | 34.65 | 38.26 |
| CDX79712 | Canola | cytosol | 37.01 | 37.9 |
| Bra005223.1-P | Field mustard | cytosol | 37.01 | 37.6 |
| KRG95997 | Soybean | mitochondrion | 37.01 | 37.6 |
| Zm00001d045423_P001 | Maize | cytosol | 37.01 | 37.6 |
| Solyc09g007970.1.1 | Tomato | cytosol | 34.65 | 36.36 |
| PGSC0003DMT400055533 | Potato | cytosol | 34.65 | 36.36 |
| CDX74993 | Canola | cytosol | 35.43 | 36.0 |
| CDY10388 | Canola | mitochondrion | 29.92 | 35.51 |
| Bra009535.1-P | Field mustard | mitochondrion | 29.92 | 35.51 |
| CDX70314 | Canola | mitochondrion | 29.92 | 35.51 |
| CDX73568 | Canola | cytosol | 35.43 | 34.62 |
| Bra006984.1-P | Field mustard | cytosol | 35.43 | 34.62 |
| CDX78160 | Canola | cytosol | 35.43 | 34.62 |
| CDY62892 | Canola | mitochondrion | 29.92 | 34.23 |
| Bra028841.1-P | Field mustard | mitochondrion | 29.92 | 34.23 |
| KRH34853 | Soybean | mitochondrion | 31.5 | 33.9 |
| Zm00001d004578_P001 | Maize | plastid | 33.07 | 33.87 |
| CDX67565 | Canola | cytosol | 34.65 | 33.59 |
| Bra003125.1-P | Field mustard | cytosol | 34.65 | 33.59 |
| CDY44355 | Canola | mitochondrion | 29.13 | 33.33 |
| AT5G03310.1 | Thale cress | mitochondrion | 29.92 | 33.33 |
| PGSC0003DMT400080544 | Potato | cytosol | 31.5 | 32.79 |
| CDY13307 | Canola | cytosol | 33.07 | 32.06 |
| Solyc10g086200.1.1 | Tomato | cytosol | 30.71 | 31.71 |
| KRG91926 | Soybean | mitochondrion | 28.35 | 28.8 |
| Zm00001d012222_P001 | Maize | cytosol | 33.86 | 28.67 |
| AT3G53250.2 | Thale cress | endoplasmic reticulum, extracellular | 34.65 | 28.39 |
| GSMUA_Achr1P09150_001 | Banana | nucleus | 42.52 | 28.27 |
| Zm00001d051962_P001 | Maize | cytosol | 34.65 | 27.5 |
| Zm00001d008420_P001 | Maize | cytosol | 26.77 | 14.47 |
| Zm00001d021237_P001 | Maize | cytosol | 27.56 | 12.32 |
| Zm00001d033729_P001 | Maize | nucleus | 35.43 | 12.3 |
| Zm00001d027753_P001 | Maize | nucleus | 29.92 | 8.98 |
| Zm00001d053311_P001 | Maize | nucleus | 18.11 | 6.73 |
Protein Annotations
| EnsemblPlants:Zm00001d003018_P001 | EnsemblPlants:Zm00001d003018_T001 | EnsemblPlantsGene:Zm00001d003018 | EntrezGene:103646211 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF9 | PFAM:PF02519 | ProteinID:ONM15891.1 |
| SEG:seg | UniParc:UPI0004DE8361 | UniProt:A0A1D6E5Z9 | MapMan:35.2 | : | : |
Description
SAUR-like auxin-responsive protein family
Coordinates
chr2:-:29562998..29563381
Molecular Weight (calculated)
14126.9 Da
IEP (calculated)
7.971
GRAVY (calculated)
-0.223
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAGSKQRRR FLNLKAFLHA WKRLAAAETA GGAGWAQLDG GEGEAAIPRD VPRGHTVVYV GEALRRYVVR VSSLDHPLFR DLLDRARDEY GFAAADTRLC
101: LPCDEDMFLA VLCHVDAQRE WSPALCS
101: LPCDEDMFLA VLCHVDAQRE WSPALCS
001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI
101: NESTFLDVVR CAGAPQHQNN CICI
Arabidopsis Description
Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.