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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006984.1-P Field mustard cytosol 97.69 97.69
CDX78160 Canola cytosol 97.69 97.69
CDX67565 Canola cytosol 87.69 87.02
CDY13307 Canola cytosol 86.92 86.26
AT3G53250.2 Thale cress endoplasmic reticulum, extracellular 83.08 69.68
CDX74993 Canola cytosol 64.62 67.2
CDY46750 Canola cytosol 63.85 66.94
CDY18466 Canola cytosol, mitochondrion 60.0 66.1
CDX91329 Canola cytosol 63.08 65.6
CDX79712 Canola cytosol 62.31 65.32
Solyc09g007970.1.1 Tomato cytosol 52.31 56.2
PGSC0003DMT400055533 Potato cytosol 52.31 56.2
KRH19939 Soybean cytosol 53.08 56.1
PGSC0003DMT400080544 Potato cytosol 51.54 54.92
Solyc10g086200.1.1 Tomato cytosol 51.54 54.47
KRH32539 Soybean cytosol 52.31 54.4
VIT_08s0040g01670.t01 Wine grape mitochondrion 51.54 54.03
KRH67711 Soybean cytosol 42.31 51.89
KRG95997 Soybean mitochondrion 47.69 49.6
CDY10388 Canola mitochondrion 40.0 48.6
CDX70314 Canola mitochondrion 40.0 48.6
CDY62892 Canola mitochondrion 38.46 45.05
CDY44355 Canola mitochondrion 37.69 44.14
Zm00001d003018_P001 Maize mitochondrion 34.62 35.43
CDY47511 Canola mitochondrion 27.69 33.33
CDX68122 Canola mitochondrion 27.69 33.33
Os04t0517900-01 Rice mitochondrion 33.08 33.33
OQU81983 Sorghum mitochondrion 32.31 33.33
CDX73181 Canola mitochondrion 27.69 33.33
CDY18596 Canola cytosol, mitochondrion, nucleus 25.38 33.0
CDX85905 Canola mitochondrion 26.92 32.41
CDX81404 Canola cytosol, mitochondrion, nucleus 24.62 32.0
CDX72576 Canola mitochondrion 23.85 31.31
CDY47053 Canola mitochondrion, plastid 23.85 31.31
CDX75460 Canola mitochondrion 25.38 30.84
CDY13831 Canola mitochondrion 24.62 30.77
CDY22408 Canola mitochondrion 24.62 30.77
CDX72733 Canola mitochondrion 24.62 30.77
CDX82007 Canola mitochondrion 24.62 30.77
CDY41947 Canola mitochondrion 24.62 30.48
CDX76303 Canola mitochondrion 24.62 29.91
CDX72500 Canola mitochondrion 24.62 29.91
CDY70461 Canola mitochondrion 24.62 29.91
CDY63257 Canola mitochondrion 24.62 29.91
CDY08909 Canola mitochondrion 23.85 29.81
CDX75553 Canola mitochondrion, plastid 23.85 29.81
CDY24829 Canola mitochondrion 23.85 29.81
CDX69199 Canola mitochondrion, plastid 23.85 29.81
CDY13560 Canola mitochondrion 24.62 29.63
CDY39041 Canola mitochondrion 24.62 29.63
CDY42589 Canola mitochondrion 23.85 29.52
CDY44482 Canola mitochondrion 25.38 29.2
CDY55152 Canola cytosol, mitochondrion 25.38 29.2
CDX69086 Canola mitochondrion 23.85 28.97
CDX89731 Canola mitochondrion 23.85 28.7
CDY29398 Canola cytosol, mitochondrion 24.62 28.32
CDX73741 Canola cytosol, mitochondrion, nucleus 22.31 28.16
CDY45331 Canola mitochondrion 23.08 28.04
CDY68553 Canola cytosol, mitochondrion, nucleus 23.08 27.78
CDY02251 Canola mitochondrion 23.08 27.78
CDY05061 Canola cytosol 20.77 27.55
CDX90724 Canola cytosol 20.77 27.55
CDY38169 Canola cytosol, mitochondrion, nucleus 22.31 26.85
CDY30334 Canola cytosol, mitochondrion, nucleus 21.54 25.93
CDY54551 Canola cytosol, mitochondrion, nucleus 21.54 25.93
TraesCS2B01G398600.1 Wheat cytosol, plastid 28.46 24.5
HORVU2Hr1G089400.1 Barley plastid 29.23 24.2
TraesCS2A01G381300.1 Wheat plastid 28.46 24.03
TraesCS2D01G377800.1 Wheat plastid 27.69 23.23
CDY20904 Canola cytosol, extracellular 22.31 22.83
GSMUA_Achr1P09150_001 Banana nucleus 33.08 22.51
Protein Annotations
EnsemblPlants:CDX73568EnsemblPlantsGene:GSBRNA2T00109117001GO:A0A078CF50GO:GO:0008150GO:GO:0009719GO:GO:0009733
InterPro:SAUR_famPANTHER:PTHR31374PANTHER:PTHR31374:SF9PFAM:PF02519ProteinID:CDX73568ProteinID:CDX73568.1
UniParc:UPI0004EEF168MapMan:35.2::::
Description
BnaC08g24350D
Coordinates
chrLK031799:-:1294882..1295274
Molecular Weight (calculated)
14893.3 Da
IEP (calculated)
8.758
GRAVY (calculated)
-0.289
Length
130 amino acids
Sequence
(BLAST)
001: MKNKFIKVCE NKLKTMKSKS IVIPCTSSFC EGCCEKVAWG FKKENEAIPK DVPRGHLVVY VGDDHKRFVI KMSLLKHPIF KALLDQAQDA YDFSSDTSRL
101: WIPCDENTFL DVVRCSGAPQ HQRKCIGMYM
Best Arabidopsis Sequence Match ( AT3G53250.2 )
(BLAST)
001: MYFTIVLLIT KPSLSLFYSS FIFETSHSIL KMKNKFIKSC ENKFRIMKSK SIVLPCCTSS CESCCDKVSW GFKKENEAIP KDVPRGHLVV YVGDDYKRFV
101: IKMSLLTHPI FKALLDQAQD AYNSSRLWIP CDENTFLDVV RCSGAPQHQR NCIGM
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQF0]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.