CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011889.1-P	Field mustard	mitochondrion	98.1	98.1
CDY41947	Canola	mitochondrion	98.1	98.1
AT4G38860.1	Thale cress	mitochondrion	94.29	94.29
CDY22408	Canola	mitochondrion	93.33	94.23
CDX72733	Canola	mitochondrion	93.33	94.23
CDY13831	Canola	mitochondrion	81.9	82.69
CDX82007	Canola	mitochondrion	81.9	82.69
CDX75460	Canola	mitochondrion	79.05	77.57
CDX69086	Canola	mitochondrion	78.1	76.64
CDY70461	Canola	mitochondrion	77.14	75.7
CDY63257	Canola	mitochondrion	77.14	75.7
CDX76303	Canola	mitochondrion	77.14	75.7
VIT_04s0023g03230.t01	Wine grape	mitochondrion	74.29	75.0
CDY13560	Canola	mitochondrion	77.14	75.0
CDX72500	Canola	mitochondrion	76.19	74.77
CDY39041	Canola	mitochondrion	76.19	74.07
CDY45331	Canola	mitochondrion	74.29	72.9
CDX85905	Canola	mitochondrion	74.29	72.22
CDY47511	Canola	mitochondrion	74.29	72.22
CDX68122	Canola	mitochondrion	74.29	72.22
KRH28787	Soybean	cytosol, mitochondrion	71.43	72.12
CDX73181	Canola	mitochondrion	73.33	71.3
Solyc03g033590.1.1	Tomato	mitochondrion	66.67	70.71
CDY47053	Canola	mitochondrion, plastid	66.67	70.71
KRH08093	Soybean	cytosol	70.48	69.81
CDY08909	Canola	mitochondrion	68.57	69.23
CDY24829	Canola	mitochondrion	68.57	69.23
KRH69796	Soybean	cytosol	70.48	69.16
PGSC0003DMT400058186	Potato	cytosol	65.71	69.0
CDX72576	Canola	mitochondrion	64.76	68.69
PGSC0003DMT400075050	Potato	cytosol	61.9	67.71
Solyc02g062230.1.1	Tomato	cytosol, mitochondrion	61.9	67.71
CDY02251	Canola	mitochondrion	67.62	65.74
CDX89731	Canola	mitochondrion	67.62	65.74
CDX69199	Canola	mitochondrion, plastid	64.76	65.38
CDX75553	Canola	mitochondrion, plastid	64.76	65.38
CDY44482	Canola	mitochondrion	69.52	64.6
PGSC0003DMT400009439	Potato	mitochondrion	60.95	63.37
CDY68553	Canola	cytosol, mitochondrion, nucleus	64.76	62.96
Solyc02g084010.1.1	Tomato	mitochondrion	60.95	62.75
CDY38169	Canola	cytosol, mitochondrion, nucleus	63.81	62.04
CDY55152	Canola	cytosol, mitochondrion	66.67	61.95
CDY29398	Canola	cytosol, mitochondrion	64.76	60.18
CDX81404	Canola	cytosol, mitochondrion, nucleus	57.14	60.0
CDY30334	Canola	cytosol, mitochondrion, nucleus	60.95	59.26
CDY54551	Canola	cytosol, mitochondrion, nucleus	60.95	59.26
CDY18596	Canola	cytosol, mitochondrion, nucleus	56.19	59.0
CDX73741	Canola	cytosol, mitochondrion, nucleus	48.57	49.51
KRH76667	Soybean	cytosol, plastid	68.57	47.68
CDY20904	Canola	cytosol, extracellular	42.86	35.43
CDX90724	Canola	cytosol	31.43	33.67
CDY05061	Canola	cytosol	31.43	33.67
CDX91329	Canola	cytosol	35.24	29.6
CDY46750	Canola	cytosol	34.29	29.03
CDX79712	Canola	cytosol	34.29	29.03
CDX70314	Canola	mitochondrion	29.52	28.97
CDY10388	Canola	mitochondrion	29.52	28.97
CDY18466	Canola	cytosol, mitochondrion	32.38	28.81
CDX74993	Canola	cytosol	34.29	28.8
CDY62892	Canola	mitochondrion	29.52	27.93
CDY44355	Canola	mitochondrion	29.52	27.93
CDX73568	Canola	cytosol	29.52	23.85
CDX78160	Canola	cytosol	29.52	23.85
CDX67565	Canola	cytosol	29.52	23.66
CDY13307	Canola	cytosol	29.52	23.66

Protein Annotations

EnsemblPlants:CDY42589	EnsemblPlantsGene:GSBRNA2T00075091001	GO:A0A078HZ45	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	ProteinID:CDY42589	ProteinID:CDY42589.1
UniParc:UPI000189D11C	UniProt:A0A078HZ45	MapMan:35.1	:	:	:

Description

BnaC01g00010DBnaC01g00010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZ45]

Coordinates

chrLK032530:+:1166..2013

Molecular Weight (calculated)

11989.8 Da

IEP (calculated)

8.081

GRAVY (calculated)

-0.050

Length

105 amino acids

Sequence
(BLAST)

001: MAVKRSSKVT QTAMLKQILK RCSSLGKKQC YDEEGLSLDV PKGHFPVYVG EKRMRYIVPI TFLSHPEFLI LLQQAEEEFG FHHDMGGLTI PCEEVVFLSL
101: TSMIR

Best Arabidopsis Sequence Match ( AT4G38860.1 )
(BLAST)

001: MAVKRSSKLT QTAMLKQILK RCSSLGKKQC YDEEGLPLDV PKGHFPVYVG EKRTRYIVPI SFLTHPEFLI LLQQAEEEFG FRHDMGGLTI PCEEVVFLSL
101: TSMIR

Arabidopsis Description

At4g38860 [Source:UniProtKB/TrEMBL;Acc:Q9T0J3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.