Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003125.1-P | Field mustard | cytosol | 98.47 | 98.47 |
| CDX67565 | Canola | cytosol | 97.71 | 97.71 |
| CDX78160 | Canola | cytosol | 88.55 | 89.23 |
| CDX73568 | Canola | cytosol | 86.26 | 86.92 |
| CDY18466 | Canola | cytosol, mitochondrion | 58.02 | 64.41 |
| CDX74993 | Canola | cytosol | 61.07 | 64.0 |
| CDY46750 | Canola | cytosol | 59.54 | 62.9 |
| CDX91329 | Canola | cytosol | 59.54 | 62.4 |
| CDX79712 | Canola | cytosol | 58.02 | 61.29 |
| Solyc09g007970.1.1 | Tomato | cytosol | 52.67 | 57.02 |
| PGSC0003DMT400055533 | Potato | cytosol | 52.67 | 57.02 |
| PGSC0003DMT400080544 | Potato | cytosol | 52.67 | 56.56 |
| Solyc10g086200.1.1 | Tomato | cytosol | 52.67 | 56.1 |
| VIT_08s0040g01670.t01 | Wine grape | mitochondrion | 51.91 | 54.84 |
| KRH19939 | Soybean | cytosol | 51.15 | 54.47 |
| KRH32539 | Soybean | cytosol | 50.38 | 52.8 |
| KRH67711 | Soybean | cytosol | 41.22 | 50.94 |
| CDX70314 | Canola | mitochondrion | 41.22 | 50.47 |
| CDY10388 | Canola | mitochondrion | 41.22 | 50.47 |
| KRG95997 | Soybean | mitochondrion | 46.56 | 48.8 |
| CDY62892 | Canola | mitochondrion | 39.69 | 46.85 |
| CDY44355 | Canola | mitochondrion | 38.93 | 45.95 |
| OQU81983 | Sorghum | mitochondrion | 33.59 | 34.92 |
| CDY47053 | Canola | mitochondrion, plastid | 25.19 | 33.33 |
| CDX72576 | Canola | mitochondrion | 25.19 | 33.33 |
| Zm00001d003018_P001 | Maize | mitochondrion | 32.06 | 33.07 |
| CDY18596 | Canola | cytosol, mitochondrion, nucleus | 25.19 | 33.0 |
| CDX68122 | Canola | mitochondrion | 26.72 | 32.41 |
| CDY47511 | Canola | mitochondrion | 26.72 | 32.41 |
| CDX73181 | Canola | mitochondrion | 26.72 | 32.41 |
| CDX81404 | Canola | cytosol, mitochondrion, nucleus | 24.43 | 32.0 |
| Os04t0517900-01 | Rice | mitochondrion | 31.3 | 31.78 |
| CDX75460 | Canola | mitochondrion | 25.95 | 31.78 |
| CDX69199 | Canola | mitochondrion, plastid | 25.19 | 31.73 |
| CDY08909 | Canola | mitochondrion | 25.19 | 31.73 |
| CDX75553 | Canola | mitochondrion, plastid | 25.19 | 31.73 |
| CDY24829 | Canola | mitochondrion | 25.19 | 31.73 |
| CDX85905 | Canola | mitochondrion | 25.95 | 31.48 |
| CDY70461 | Canola | mitochondrion | 25.19 | 30.84 |
| CDY63257 | Canola | mitochondrion | 25.19 | 30.84 |
| CDX76303 | Canola | mitochondrion | 25.19 | 30.84 |
| CDX72500 | Canola | mitochondrion | 25.19 | 30.84 |
| CDY13831 | Canola | mitochondrion | 24.43 | 30.77 |
| CDX82007 | Canola | mitochondrion | 24.43 | 30.77 |
| CDY22408 | Canola | mitochondrion | 24.43 | 30.77 |
| CDX72733 | Canola | mitochondrion | 24.43 | 30.77 |
| CDY41947 | Canola | mitochondrion | 24.43 | 30.48 |
| CDX69086 | Canola | mitochondrion | 24.43 | 29.91 |
| CDX89731 | Canola | mitochondrion | 24.43 | 29.63 |
| CDY13560 | Canola | mitochondrion | 24.43 | 29.63 |
| CDY39041 | Canola | mitochondrion | 24.43 | 29.63 |
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 24.43 | 29.63 |
| CDY42589 | Canola | mitochondrion | 23.66 | 29.52 |
| CDY55152 | Canola | cytosol, mitochondrion | 25.19 | 29.2 |
| CDY44482 | Canola | mitochondrion | 25.19 | 29.2 |
| CDX73741 | Canola | cytosol, mitochondrion, nucleus | 22.9 | 29.13 |
| CDY45331 | Canola | mitochondrion | 23.66 | 28.97 |
| CDY38169 | Canola | cytosol, mitochondrion, nucleus | 23.66 | 28.7 |
| CDY02251 | Canola | mitochondrion | 23.66 | 28.7 |
| CDY29398 | Canola | cytosol, mitochondrion | 24.43 | 28.32 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 22.9 | 27.78 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 22.9 | 27.78 |
| CDX90724 | Canola | cytosol | 19.85 | 26.53 |
| CDY05061 | Canola | cytosol | 19.85 | 26.53 |
| CDY20904 | Canola | cytosol, extracellular | 23.66 | 24.41 |
| TraesCS2D01G377800.1 | Wheat | plastid | 27.48 | 23.23 |
| TraesCS2B01G398600.1 | Wheat | cytosol, plastid | 26.72 | 23.18 |
| TraesCS2A01G381300.1 | Wheat | plastid | 26.72 | 22.73 |
| HORVU2Hr1G089400.1 | Barley | plastid | 26.72 | 22.29 |
| GSMUA_Achr1P09150_001 | Banana | nucleus | 32.06 | 21.99 |
Protein Annotations
| EnsemblPlants:CDY13307 | EnsemblPlantsGene:GSBRNA2T00071294001 | GO:A0A078FJW9 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF9 | PFAM:PF02519 | PFscan:PS51257 | ProteinID:CDY13307 |
| ProteinID:CDY13307.1 | UniParc:UPI0004EE90D1 | UniProt:A0A078FJW9 | MapMan:35.2 | : | : |
Description
BnaC06g14500DBnaC06g14500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJW9]
Coordinates
chrLK032034:-:184302..184697
Molecular Weight (calculated)
15191.5 Da
IEP (calculated)
8.560
GRAVY (calculated)
-0.269
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNKFIKACE NKFKTMKSKS IVIQCCTSFS CESCYEKVSW GFKKENEVIP KDVPKGHLVV YVGDDYKRFV IKMSLLKHPI FKALLDLAQD AYDFSSDSSK
101: LWIPCDENTF LDVVRCSGAP QQQRNCIYMY M
101: LWIPCDENTF LDVVRCSGAP QQQRNCIYMY M
001: MYFTIVLLIT KPSLSLFYSS FIFETSHSIL KMKNKFIKSC ENKFRIMKSK SIVLPCCTSS CESCCDKVSW GFKKENEAIP KDVPRGHLVV YVGDDYKRFV
101: IKMSLLTHPI FKALLDQAQD AYNSSRLWIP CDENTFLDVV RCSGAPQHQR NCIGM
101: IKMSLLTHPI FKALLDQAQD AYNSSRLWIP CDENTFLDVV RCSGAPQHQR NCIGM
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQF0]
SUBAcon: [extracellular,endoplasmic reticulum]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.