Factsheet for TraesCS2D01G377800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G381300.1	Wheat	plastid	96.77	97.4
TraesCS2B01G398600.1	Wheat	cytosol, plastid	86.45	88.74
HORVU2Hr1G089400.1	Barley	plastid	87.1	85.99
Os04t0517900-01	Rice	mitochondrion	58.71	70.54
OQU81983	Sorghum	mitochondrion	54.84	67.46
Zm00001d003018_P001	Maize	mitochondrion	52.26	63.78
KRH19939	Soybean	cytosol	37.42	47.15
KRH32539	Soybean	cytosol	36.13	44.8
VIT_08s0040g01670.t01	Wine grape	mitochondrion	31.61	39.52
KRH67711	Soybean	cytosol	25.81	37.74
Bra017211.1-P	Field mustard	mitochondrion	27.74	36.44
KRH34853	Soybean	mitochondrion	27.74	36.44
CDY18466	Canola	cytosol, mitochondrion	27.74	36.44
Solyc09g007970.1.1	Tomato	cytosol	27.74	35.54
PGSC0003DMT400055533	Potato	cytosol	27.74	35.54
Bra009535.1-P	Field mustard	mitochondrion	24.52	35.51
CDX70314	Canola	mitochondrion	24.52	35.51
CDY10388	Canola	mitochondrion	24.52	35.51
KRG95997	Soybean	mitochondrion	28.39	35.2
AT5G03310.1	Thale cress	mitochondrion	25.16	34.21
CDY46750	Canola	cytosol	27.1	33.87
Bra023093.1-P	Field mustard	cytosol	27.1	33.87
TraesCS7D01G072600.1	Wheat	mitochondrion	27.1	33.6
CDY62892	Canola	mitochondrion	23.87	33.33
Bra028841.1-P	Field mustard	mitochondrion	23.87	33.33
CDX79712	Canola	cytosol	26.45	33.06
CDX91329	Canola	cytosol	26.45	32.8
CDX74993	Canola	cytosol	26.45	32.8
PGSC0003DMT400080544	Potato	cytosol	25.81	32.79
CDY44355	Canola	mitochondrion	23.23	32.43
AT2G37030.1	Thale cress	cytosol	25.81	32.26
KRG91926	Soybean	mitochondrion	25.81	32.0
Bra005223.1-P	Field mustard	cytosol	25.81	32.0
Solyc10g086200.1.1	Tomato	cytosol	25.16	31.71
GSMUA_Achr1P09150_001	Banana	nucleus	36.77	29.84
CDX73568	Canola	cytosol	23.23	27.69
Bra006984.1-P	Field mustard	cytosol	23.23	27.69
CDX78160	Canola	cytosol	23.23	27.69
CDY13307	Canola	cytosol	23.23	27.48
CDX67565	Canola	cytosol	22.58	26.72
Bra003125.1-P	Field mustard	cytosol	22.58	26.72
AT3G53250.2	Thale cress	endoplasmic reticulum, extracellular	25.16	25.16

Protein Annotations

EnsemblPlants:TraesCS2D01G377800.1	EnsemblPlantsGene:TraesCS2D01G377800	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	SEG:seg	MapMan:35.2	:

Description

No Description!

Coordinates

chr2D:-:482327837..482328304

Molecular Weight (calculated)

17535.1 Da

IEP (calculated)

8.219

GRAVY (calculated)

-0.122

Length

155 amino acids

Sequence
(BLAST)

001: MAAYIYRIYA AVSPHSATQT HVRMVRSSGM KGGRRSNRRL LRSFLGACRK LSAELQLLGP TASAWVQLEA GDEAIPVDVP RGHTVVYVGE ELRRYVVRVS
101: SLDHPLFREL LDRAREEYEF AADAKLCLPC DEDIFLAVLC HVDSKHDYWR LALCS

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.