Factsheet for HORVU2Hr1G089400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G381300.1	Wheat	plastid	85.99	87.66
TraesCS2D01G377800.1	Wheat	plastid	85.99	87.1
TraesCS2B01G398600.1	Wheat	cytosol, plastid	80.89	84.11
Os04t0517900-01	Rice	mitochondrion	61.15	74.42
OQU81983	Sorghum	mitochondrion	55.41	69.05
Zm00001d003018_P001	Maize	mitochondrion	54.14	66.93
KRH19939	Soybean	cytosol	35.03	44.72
KRH32539	Soybean	cytosol	33.76	42.4
VIT_08s0040g01670.t01	Wine grape	mitochondrion	31.21	39.52
KRH67711	Soybean	cytosol	25.48	37.74
Bra017211.1-P	Field mustard	mitochondrion	26.75	35.59
KRH34853	Soybean	mitochondrion	26.75	35.59
CDY18466	Canola	cytosol, mitochondrion	26.75	35.59
CDY46750	Canola	cytosol	28.03	35.48
Bra023093.1-P	Field mustard	cytosol	28.03	35.48
Solyc09g007970.1.1	Tomato	cytosol	26.75	34.71
PGSC0003DMT400055533	Potato	cytosol	26.75	34.71
CDX79712	Canola	cytosol	27.39	34.68
AT2G37030.1	Thale cress	cytosol	27.39	34.68
CDX70314	Canola	mitochondrion	23.57	34.58
Bra009535.1-P	Field mustard	mitochondrion	23.57	34.58
CDY10388	Canola	mitochondrion	23.57	34.58
CDX91329	Canola	cytosol	27.39	34.4
KRG95997	Soybean	mitochondrion	27.39	34.4
CDX74993	Canola	cytosol	27.39	34.4
Bra005223.1-P	Field mustard	cytosol	26.75	33.6
AT5G03310.1	Thale cress	mitochondrion	23.57	32.46
CDY62892	Canola	mitochondrion	22.93	32.43
Bra028841.1-P	Field mustard	mitochondrion	22.93	32.43
CDY44355	Canola	mitochondrion	22.29	31.53
PGSC0003DMT400080544	Potato	cytosol	24.2	31.15
KRG91926	Soybean	mitochondrion	24.2	30.4
Solyc10g086200.1.1	Tomato	cytosol	23.57	30.08
GSMUA_Achr1P09150_001	Banana	nucleus	35.67	29.32
CDX78160	Canola	cytosol	24.2	29.23
CDX73568	Canola	cytosol	24.2	29.23
Bra006984.1-P	Field mustard	cytosol	24.2	29.23
CDX67565	Canola	cytosol	22.93	27.48
Bra003125.1-P	Field mustard	cytosol	22.93	27.48
CDY13307	Canola	cytosol	22.29	26.72
AT3G53250.2	Thale cress	endoplasmic reticulum, extracellular	26.11	26.45
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	27.39	23.89

Protein Annotations

EnsemblPlants:HORVU2Hr1G089400.1	EnsemblPlantsGene:HORVU2Hr1G089400	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF9	PFAM:PF02519	SEG:seg	UniParc:UPI000296A56F	UniProt:M0YE68
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:638693171..638694116

Molecular Weight (calculated)

17751.3 Da

IEP (calculated)

7.840

GRAVY (calculated)

-0.175

Length

157 amino acids

Sequence
(BLAST)

001: MAAYICRIYA ATTQTYGHTY VRMVRSSGMK GGRRSNRRLL RSFLGACRRL SAELQLLRAA APTASAWAQL EDGDEAIPVD VPRGHTVVYV GEELRRYVVR
101: VSSLDHPLFR ELLDGAREEY EFAADARLCL PCDEDIFLGV LCHVDPKHEH WRLALCS

Best Arabidopsis Sequence Match ( AT2G37030.1 )
(BLAST)

001: MKSKFIKSCE KKLKKMTSKV IIPCASCESC YERICWAFKK EAEVIPRDVP KGHLVVYVGE EYKRFVININ LLKHPLFQAL LDQAQDAYGF SADSRLWIPC
101: NESTFLDVVR CAGAPQHQNN CICI

Arabidopsis Description

Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.