Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 4
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc09g065820.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36110.1 | Solyc09g065820.2.1 | AT4G02590.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075050 | Potato | cytosol | 95.83 | 95.83 |
| Solyc03g033590.1.1 | Tomato | mitochondrion | 87.5 | 84.85 |
| Solyc02g084010.1.1 | Tomato | mitochondrion | 87.5 | 82.35 |
| VIT_04s0023g03230.t01 | Wine grape | mitochondrion | 76.04 | 70.19 |
| KRH28787 | Soybean | cytosol, mitochondrion | 76.04 | 70.19 |
| AT2G21220.1 | Thale cress | mitochondrion | 72.92 | 67.31 |
| AT4G34760.1 | Thale cress | mitochondrion | 73.96 | 66.36 |
| Bra011560.1-P | Field mustard | mitochondrion | 73.96 | 66.36 |
| CDX75460 | Canola | mitochondrion | 73.96 | 66.36 |
| CDY13831 | Canola | mitochondrion | 71.88 | 66.35 |
| CDX82007 | Canola | mitochondrion | 71.88 | 66.35 |
| Bra031171.1-P | Field mustard | mitochondrion | 71.88 | 66.35 |
| Solyc01g110580.2.1 | Tomato | mitochondrion | 65.62 | 65.62 |
| Bra017676.1-P | Field mustard | mitochondrion | 72.92 | 65.42 |
| CDY45331 | Canola | mitochondrion | 72.92 | 65.42 |
| CDX69086 | Canola | mitochondrion | 72.92 | 65.42 |
| Bra034651.1-P | Field mustard | mitochondrion | 70.83 | 65.38 |
| KRH08093 | Soybean | cytosol | 71.88 | 65.09 |
| Solyc01g110570.2.1 | Tomato | mitochondrion | 70.83 | 64.76 |
| AT4G38860.1 | Thale cress | mitochondrion | 70.83 | 64.76 |
| Bra017747.1-P | Field mustard | mitochondrion, plastid | 66.67 | 64.65 |
| CDY47053 | Canola | mitochondrion, plastid | 66.67 | 64.65 |
| CDX76303 | Canola | mitochondrion | 71.88 | 64.49 |
| KRH69796 | Soybean | cytosol | 71.88 | 64.49 |
| CDY63257 | Canola | mitochondrion | 71.88 | 64.49 |
| CDY70461 | Canola | mitochondrion | 71.88 | 64.49 |
| Bra010501.1-P | Field mustard | mitochondrion | 69.79 | 64.42 |
| CDY08909 | Canola | mitochondrion | 69.79 | 64.42 |
| CDY24829 | Canola | mitochondrion | 69.79 | 64.42 |
| Solyc01g110590.2.1 | Tomato | mitochondrion | 68.75 | 62.86 |
| Bra011889.1-P | Field mustard | mitochondrion | 68.75 | 62.86 |
| CDY41947 | Canola | mitochondrion | 68.75 | 62.86 |
| CDX72576 | Canola | mitochondrion | 64.58 | 62.63 |
| CDX72500 | Canola | mitochondrion | 69.79 | 62.62 |
| CDX72733 | Canola | mitochondrion | 67.71 | 62.5 |
| Bra033581.1-P | Field mustard | mitochondrion | 67.71 | 62.5 |
| CDY22408 | Canola | mitochondrion | 67.71 | 62.5 |
| Solyc04g081270.1.1 | Tomato | mitochondrion | 69.79 | 62.04 |
| CDY42589 | Canola | mitochondrion | 67.71 | 61.9 |
| AT4G36110.1 | Thale cress | mitochondrion | 66.67 | 61.54 |
| Bra024482.1-P | Field mustard | mitochondrion | 68.75 | 61.11 |
| Solyc10g054720.1.1 | Tomato | mitochondrion | 68.75 | 60.55 |
| AT2G16580.1 | Thale cress | mitochondrion | 67.71 | 60.19 |
| Bra011662.1-P | Field mustard | mitochondrion, plastid | 64.58 | 59.62 |
| CDX69199 | Canola | mitochondrion, plastid | 64.58 | 59.62 |
| CDX75553 | Canola | mitochondrion, plastid | 64.58 | 59.62 |
| CDY68553 | Canola | cytosol, mitochondrion, nucleus | 66.67 | 59.26 |
| CDX89731 | Canola | mitochondrion | 66.67 | 59.26 |
| AT2G18010.1 | Thale cress | cytosol, plastid | 68.75 | 58.93 |
| Bra013061.1-P | Field mustard | mitochondrion | 65.62 | 58.33 |
| Bra039909.1-P | Field mustard | mitochondrion | 65.62 | 58.33 |
| Solyc01g110610.2.1 | Tomato | cytosol, mitochondrion, nucleus | 65.62 | 58.33 |
| CDY02251 | Canola | mitochondrion | 65.62 | 58.33 |
| CDY38169 | Canola | cytosol, mitochondrion, nucleus | 65.62 | 58.33 |
| Solyc01g110620.1.1 | Tomato | mitochondrion | 63.54 | 58.1 |
| CDY54551 | Canola | cytosol, mitochondrion, nucleus | 64.58 | 57.41 |
| Bra037243.1-P | Field mustard | cytosol, mitochondrion, nucleus | 64.58 | 57.41 |
| CDY30334 | Canola | cytosol, mitochondrion, nucleus | 64.58 | 57.41 |
| KRH76667 | Soybean | cytosol, plastid | 72.92 | 46.36 |
| CDY20904 | Canola | cytosol, extracellular | 53.12 | 40.16 |
| Solyc06g065220.1.1 | Tomato | cytosol | 35.42 | 35.05 |
| Solyc09g007970.1.1 | Tomato | cytosol | 37.5 | 29.75 |
| Solyc10g086200.1.1 | Tomato | cytosol | 37.5 | 29.27 |
Protein Annotations
| EnsemblPlants:Solyc02g062230.1.1 | EnsemblPlantsGene:Solyc02g062230.1 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF35 | PFAM:PF02519 | SEG:seg | UniParc:UPI00027680A0 | UniProt:K4B6B2 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:33828461..33828751
Molecular Weight (calculated)
10935.1 Da
IEP (calculated)
8.098
GRAVY (calculated)
-0.317
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MALKKATQTA ALKQILKKCS SFGKNENGLP NDVPKGHFVV YVGENRSRYI IPISWLTHPQ FQTLLQRAEE EFGFNHDMGI TIPCHEHDFC SLISNF
001: MAVKRSSKLT QTAMLKQILK RCSSLAKNQC YDEDGLPVDV PKGHFPVYVG EKRSRYIVPI SFLTHPKFKS LLQQAEEEFG FNHDMGLTIP CEEVVFRSLT
101: SMIG
101: SMIG
Arabidopsis Description
Putative auxin-regulated protein [Source:UniProtKB/TrEMBL;Acc:Q9SIG9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.