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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • nucleus 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d008420_P001 Maize cytosol 45.36 70.64
Zm00001d051802_P001 Maize mitochondrion 21.58 68.7
Zm00001d004578_P001 Maize plastid 23.22 68.55
Zm00001d045423_P001 Maize cytosol 22.4 65.6
Zm00001d021237_P001 Maize cytosol 49.73 64.08
Os06t0137400-00 Rice mitochondrion 20.77 63.87
KXG19242 Sorghum mitochondrion 21.31 61.42
TraesCS7A01G077000.1 Wheat mitochondrion 18.58 56.67
TraesCS4A01G375500.1 Wheat mitochondrion 18.31 56.3
GSMUA_Achr7P06520_001 Banana mitochondrion 15.57 55.34
GSMUA_Achr3P11290_001 Banana mitochondrion 14.75 52.94
GSMUA_Achr1P19860_001 Banana mitochondrion 15.3 52.83
TraesCS7D01G072600.1 Wheat mitochondrion 18.03 52.8
Bra008207.1-P Field mustard cytosol, mitochondrion 13.39 51.58
GSMUA_Achr11P... Banana mitochondrion 14.48 51.46
Zm00001d027753_P001 Maize nucleus 59.02 51.06
GSMUA_Achr5P11350_001 Banana mitochondrion 13.66 51.02
GSMUA_Achr1P02500_001 Banana mitochondrion 13.66 50.51
GSMUA_Achr1P06110_001 Banana mitochondrion 13.66 50.51
VIT_18s0001g13980.t01 Wine grape mitochondrion 14.21 50.0
Zm00001d012222_P001 Maize cytosol 20.49 50.0
VIT_03s0038g00950.t01 Wine grape mitochondrion 14.21 50.0
PGSC0003DMT400004089 Potato cytosol 13.66 49.51
CDX85905 Canola mitochondrion 14.48 49.07
Bra003746.1-P Field mustard mitochondrion 14.48 49.07
CDX68122 Canola mitochondrion 14.48 49.07
PGSC0003DMT400009665 Potato mitochondrion 14.21 48.15
CDY13560 Canola mitochondrion 14.21 48.15
Zm00001d051962_P001 Maize cytosol 21.04 48.12
KRH61056 Soybean mitochondrion 13.11 48.0
KRH51719 Soybean mitochondrion 13.11 48.0
Solyc04g081270.1.1 Tomato mitochondrion 13.93 47.22
AT1G75580.1 Thale cress mitochondrion 13.93 47.22
CDY39041 Canola mitochondrion 13.93 47.22
KRH60748 Soybean cytosol 13.66 47.17
KRH51448 Soybean cytosol 13.66 47.17
PGSC0003DMT400004186 Potato mitochondrion 12.3 46.88
Solyc01g110580.2.1 Tomato mitochondrion 12.3 46.88
Solyc10g054720.1.1 Tomato mitochondrion 13.93 46.79
PGSC0003DMT400004187 Potato mitochondrion 13.39 46.67
Solyc01g110570.2.1 Tomato mitochondrion 13.39 46.67
KRH24349 Soybean mitochondrion 13.39 46.67
Bra015832.1-P Field mustard mitochondrion 13.66 46.3
CDX73181 Canola mitochondrion 13.66 46.3
CDY47511 Canola mitochondrion 13.66 46.3
PGSC0003DMT400068694 Potato mitochondrion 13.39 44.95
PGSC0003DMT400004090 Potato mitochondrion 12.84 44.76
Solyc01g110590.2.1 Tomato mitochondrion 12.84 44.76
Zm00001d053311_P001 Maize nucleus 41.8 44.74
PGSC0003DMT400004167 Potato mitochondrion 13.11 44.44
KRH39815 Soybean mitochondrion 12.57 44.23
Solyc01g110610.2.1 Tomato cytosol, mitochondrion, nucleus 12.84 43.52
Solyc01g110620.1.1 Tomato mitochondrion 12.02 41.9
AT1G19830.1 Thale cress mitochondrion 13.39 41.88
CDY44482 Canola mitochondrion 12.84 41.59
PGSC0003DMT400004165 Potato mitochondrion 12.02 41.51
CDY55152 Canola cytosol, mitochondrion 12.57 40.71
Bra025770.1-P Field mustard cytosol, mitochondrion 12.57 40.71
CDY29398 Canola cytosol, mitochondrion 12.3 39.82
PGSC0003DMT400087067 Potato mitochondrion 11.48 38.18
HORVU7Hr1G017790.1 Barley extracellular, mitochondrion, plastid 18.03 36.67
Zm00001d003018_P001 Maize mitochondrion 12.3 35.43
Protein Annotations
MapMan:15.5.32UniProt:A0A1D6L1V9GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0009719GO:GO:0009733GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638
ProteinID:ONM08497.1PFAM:PF02519PANTHER:PTHR31374PANTHER:PTHR31374:SF35InterPro:SAUR_famSUPFAM:SSF47459
UniParc:UPI0008DB351AEnsemblPlantsGene:Zm00001d033729EnsemblPlants:Zm00001d033729_P001EnsemblPlants:Zm00001d033729_T001InterPro:bHLH_domSEG:seg
Description
bHLH-transcription factor 93SAUR-like auxin-responsive protein family
Coordinates
chr1:-:272362116..272364398
Molecular Weight (calculated)
39213.9 Da
IEP (calculated)
4.775
GRAVY (calculated)
-0.463
Length
366 amino acids
Sequence
(BLAST)
001: MPPTPNPKNL AASLPILTLG GGASGGGRPP SKFESATVDL PTSVILLAAV DRGSDEMAPP DPEDGSREEK RTKASKLQEQ GEGEEEATGL PSDVPRGHFA
101: VYVGERRRRF VVPITLLDRP EFRYLLRRAK EEFGFTSAGG ALVLPCEEVA FCSLTSALAC ARPRPAPPSD RDPLGTSDIT AEETAAWFPD TLDDPLEKDL
201: YTQLWYSTIA DAAPQHEGTF PGPTSHPSPP LPPVGSSNVE SSWAGDICST FCDNNQVPRT STGIRGKDAA LQSNVPSGAG AHDGTSSSEK KGPNQRKDAC
301: VARADPTLQQ GRLIHVMHIF LSGASPLNTE IQTNKASILD ETIEYLKSLQ MQVQVSSYYL NLHDPI
Best Arabidopsis Sequence Match ( AT4G38860.1 )
(BLAST)
001: MAVKRSSKLT QTAMLKQILK RCSSLGKKQC YDEEGLPLDV PKGHFPVYVG EKRTRYIVPI SFLTHPEFLI LLQQAEEEFG FRHDMGGLTI PCEEVVFLSL
101: TSMIR
Arabidopsis Description
At4g38860 [Source:UniProtKB/TrEMBL;Acc:Q9T0J3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.