Factsheet for PGSC0003DMT400004167

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g110610.2.1	Tomato	cytosol, mitochondrion, nucleus	96.3	96.3
PGSC0003DMT400004187	Potato	mitochondrion	87.04	89.52
VIT_03s0038g00950.t01	Wine grape	mitochondrion	81.48	84.62
PGSC0003DMT400004089	Potato	cytosol	77.78	83.17
PGSC0003DMT400004165	Potato	mitochondrion	80.56	82.08
PGSC0003DMT400004090	Potato	mitochondrion	78.7	80.95
GSMUA_Achr1P02500_001	Banana	mitochondrion	74.07	80.81
PGSC0003DMT400068694	Potato	mitochondrion	81.48	80.73
KRH51448	Soybean	cytosol	78.7	80.19
KRH60748	Soybean	cytosol	78.7	80.19
KRH24349	Soybean	mitochondrion	76.85	79.05
KRH39815	Soybean	mitochondrion	75.93	78.85
GSMUA_Achr5P11350_001	Banana	mitochondrion	71.3	78.57
GSMUA_Achr11P...	Banana	mitochondrion	73.15	76.7
PGSC0003DMT400004186	Potato	mitochondrion	64.81	72.92
GSMUA_Achr3P11290_001	Banana	mitochondrion	66.67	70.59
PGSC0003DMT400009665	Potato	mitochondrion	70.37	70.37
PGSC0003DMT400087067	Potato	mitochondrion	71.3	70.0
GSMUA_Achr7P06520_001	Banana	mitochondrion	63.89	66.99
PGSC0003DMT400058186	Potato	cytosol	61.11	66.0
PGSC0003DMT400075050	Potato	cytosol	58.33	65.62
GSMUA_Achr1P06110_001	Banana	mitochondrion	58.33	63.64
GSMUA_Achr1P19860_001	Banana	mitochondrion	62.04	63.21
PGSC0003DMT400009439	Potato	mitochondrion	58.33	62.38
Os02t0445600-01	Rice	cytosol, mitochondrion	55.56	61.86
Os02t0445100-01	Rice	mitochondrion	49.07	55.21
Zm00001d051802_P001	Maize	mitochondrion	55.56	52.17
Os06t0137400-00	Rice	mitochondrion	56.48	51.26
KXG19242	Sorghum	mitochondrion	59.26	50.39
Zm00001d045423_P001	Maize	cytosol	56.48	48.8
TraesCS4A01G375500.1	Wheat	mitochondrion	52.78	47.9
TraesCS7A01G077000.1	Wheat	mitochondrion	52.78	47.5
TraesCS7D01G072600.1	Wheat	mitochondrion	52.78	45.6
Zm00001d004578_P001	Maize	plastid	46.3	40.32
Zm00001d012222_P001	Maize	cytosol	49.07	35.33
PGSC0003DMT400067154	Potato	cytosol	33.33	34.29
Zm00001d051962_P001	Maize	cytosol	50.0	33.75
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	51.85	31.11
PGSC0003DMT400055533	Potato	cytosol	31.48	28.1
PGSC0003DMT400080544	Potato	cytosol	30.56	27.05
Zm00001d008420_P001	Maize	cytosol	38.89	17.87
Zm00001d021237_P001	Maize	cytosol	37.96	14.44
Zm00001d033729_P001	Maize	nucleus	44.44	13.11
Zm00001d027753_P001	Maize	nucleus	37.96	9.69
Zm00001d053311_P001	Maize	nucleus	22.22	7.02

Protein Annotations

EnsemblPlants:PGSC0003DMT400004167	EnsemblPlantsGene:PGSC0003DMG400001654	EntrezGene:102603667	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	PGSC:PGSC0003DMG400001654	RefSeq:XP_006359708.1
UniParc:UPI000294E819	UniProt:M0ZN02	MapMan:35.1	:	:	:

Description

SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001654]

Coordinates

chr1:+:86988283..86988609

Molecular Weight (calculated)

12483.0 Da

IEP (calculated)

6.504

GRAVY (calculated)

-0.219

Length

108 amino acids

Sequence
(BLAST)

001: MAIRKSNKLS HSAILKQIII RCSSLGVKQG YDDEDYQLPI DVPKGHFAVY VGENRTRYIV PISFLTHPEF QCLLRQSEEE FGFDHDMGIT IPCEEVVFRS
101: LTNSMLRY

Best Arabidopsis Sequence Match ( AT1G75580.1 )
(BLAST)

001: MAMKKANKLT QTAMIKQILK RCSSLGKKQS NVYGEDENGS PLNVPKGHFV VYVGENRVRY VVPISFLTRP EFQLLLQQAE EEFGFDHDMG LTIPCEEVVF
101: RSLTSMLR

Arabidopsis Description

At1g75580 [Source:UniProtKB/TrEMBL;Acc:Q9LR00]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.