Factsheet for PGSC0003DMT400004089

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004090	Potato	mitochondrion	87.13	83.81
VIT_03s0038g00950.t01	Wine grape	mitochondrion	86.14	83.65
PGSC0003DMT400004187	Potato	mitochondrion	86.14	82.86
PGSC0003DMT400004186	Potato	mitochondrion	77.23	81.25
PGSC0003DMT400068694	Potato	mitochondrion	87.13	80.73
KRH39815	Soybean	mitochondrion	80.2	77.88
PGSC0003DMT400004167	Potato	mitochondrion	83.17	77.78
KRH51448	Soybean	cytosol	81.19	77.36
KRH60748	Soybean	cytosol	81.19	77.36
KRH24349	Soybean	mitochondrion	80.2	77.14
GSMUA_Achr1P02500_001	Banana	mitochondrion	75.25	76.77
PGSC0003DMT400004165	Potato	mitochondrion	80.2	76.42
GSMUA_Achr5P11350_001	Banana	mitochondrion	71.29	73.47
PGSC0003DMT400087067	Potato	mitochondrion	79.21	72.73
GSMUA_Achr11P...	Banana	mitochondrion	73.27	71.84
PGSC0003DMT400009665	Potato	mitochondrion	76.24	71.3
PGSC0003DMT400075050	Potato	cytosol	67.33	70.83
PGSC0003DMT400058186	Potato	cytosol	69.31	70.0
GSMUA_Achr3P11290_001	Banana	mitochondrion	70.3	69.61
GSMUA_Achr1P06110_001	Banana	mitochondrion	66.34	67.68
GSMUA_Achr7P06520_001	Banana	mitochondrion	68.32	66.99
PGSC0003DMT400009439	Potato	mitochondrion	63.37	63.37
GSMUA_Achr1P19860_001	Banana	mitochondrion	66.34	63.21
Os02t0445600-01	Rice	cytosol, mitochondrion	58.42	60.82
Os02t0445100-01	Rice	mitochondrion	51.49	54.17
Zm00001d051802_P001	Maize	mitochondrion	57.43	50.43
Os06t0137400-00	Rice	mitochondrion	59.41	50.42
TraesCS4A01G375500.1	Wheat	mitochondrion	56.44	47.9
TraesCS7A01G077000.1	Wheat	mitochondrion	56.44	47.5
KXG19242	Sorghum	mitochondrion	59.41	47.24
Zm00001d045423_P001	Maize	cytosol	58.42	47.2
TraesCS7D01G072600.1	Wheat	mitochondrion	56.44	45.6
Zm00001d004578_P001	Maize	plastid	46.53	37.9
PGSC0003DMT400067154	Potato	cytosol	35.64	34.29
Zm00001d012222_P001	Maize	cytosol	50.49	34.0
Zm00001d051962_P001	Maize	cytosol	51.49	32.5
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	55.45	31.11
PGSC0003DMT400055533	Potato	cytosol	34.65	28.93
PGSC0003DMT400080544	Potato	cytosol	32.67	27.05
Zm00001d008420_P001	Maize	cytosol	40.59	17.45
Zm00001d021237_P001	Maize	cytosol	41.58	14.79
Zm00001d033729_P001	Maize	nucleus	49.51	13.66
Zm00001d027753_P001	Maize	nucleus	40.59	9.69
Zm00001d053311_P001	Maize	nucleus	22.77	6.73

Protein Annotations

EnsemblPlants:PGSC0003DMT400004089	EnsemblPlantsGene:PGSC0003DMG400001614	EntrezGene:102601200	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	PGSC:PGSC0003DMG400001614	RefSeq:XP_006359617.1
UniParc:UPI000294CD5A	UniProt:M0ZMV6	MapMan:35.1	:	:	:

Description

SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001614]

Coordinates

chr1:-:86969863..86970598

Molecular Weight (calculated)

11516.1 Da

IEP (calculated)

7.971

GRAVY (calculated)

-0.178

Length

101 amino acids

Sequence
(BLAST)

001: MAIKKSTKLS QSPVLKQILK KCSSLGKKNE DHLPVDVPKG HFAVYVGENR TRYIVPISFL SHPEFQCLLR CAEEEFGFDH DMGITIPCEE FVFQSLTSML
101: R

Best Arabidopsis Sequence Match ( AT4G34760.1 )
(BLAST)

001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR

Arabidopsis Description

SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.