Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g065220.1.1 | Tomato | cytosol | 89.52 | 96.91 |
| VIT_07s0130g00100.t01 | Wine grape | cytosol | 46.67 | 61.25 |
| KRH54020 | Soybean | cytosol | 40.0 | 52.5 |
| KRH63924 | Soybean | cytosol | 39.05 | 51.9 |
| Bra000682.1-P | Field mustard | cytosol | 44.76 | 47.96 |
| CDY05061 | Canola | cytosol | 44.76 | 47.96 |
| CDX90724 | Canola | cytosol | 44.76 | 47.96 |
| AT4G09530.1 | Thale cress | cytosol | 42.86 | 43.69 |
| PGSC0003DMT400009439 | Potato | mitochondrion | 36.19 | 37.62 |
| PGSC0003DMT400075050 | Potato | cytosol | 34.29 | 37.5 |
| PGSC0003DMT400004089 | Potato | cytosol | 34.29 | 35.64 |
| PGSC0003DMT400058186 | Potato | cytosol | 33.33 | 35.0 |
| PGSC0003DMT400004186 | Potato | mitochondrion | 31.43 | 34.38 |
| PGSC0003DMT400004187 | Potato | mitochondrion | 34.29 | 34.29 |
| PGSC0003DMT400004167 | Potato | mitochondrion | 34.29 | 33.33 |
| PGSC0003DMT400004090 | Potato | mitochondrion | 33.33 | 33.33 |
| PGSC0003DMT400068694 | Potato | mitochondrion | 34.29 | 33.03 |
| PGSC0003DMT400004165 | Potato | mitochondrion | 33.33 | 33.02 |
| PGSC0003DMT400009665 | Potato | mitochondrion | 33.33 | 32.41 |
| PGSC0003DMT400087067 | Potato | mitochondrion | 32.38 | 30.91 |
| PGSC0003DMT400055533 | Potato | cytosol | 31.43 | 27.27 |
| PGSC0003DMT400080544 | Potato | cytosol | 31.43 | 27.05 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400067154 | EnsemblPlantsGene:PGSC0003DMG400026108 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF55 | PFAM:PF02519 | PGSC:PGSC0003DMG400026108 | UniParc:UPI00029673DE | UniProt:M1CGS9 |
| MapMan:35.2 | : | : | : | : | : |
Description
SAUR family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400026108]
Coordinates
chr6:+:46648553..46648870
Molecular Weight (calculated)
12014.5 Da
IEP (calculated)
10.184
GRAVY (calculated)
-0.469
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKKNTTTTK LEDHEGRIRS RTPKGHFVVY VGSEMKRFVL PTSYLKNPLF QNLLDKAAEE YGFDNGNIIL LPCDESSFRR LIAMLARSSS FNSTRINPIV
101: NHQLT
101: NHQLT
001: MPHKVIDMHF HEREEEEDTG ESRSSSRTPR GHFVVYVGTK KKLERFVIPT TFLKSPSFQK LLDNAAEEFG YAEAHRDKIV LPCDVSTFRS LVMFLTSHQD
101: KSH
101: KSH
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9M0P0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.