Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH54020 | Soybean | cytosol | 55.0 | 55.0 |
| KRH63924 | Soybean | cytosol | 52.5 | 53.16 |
| Solyc06g065220.1.1 | Tomato | cytosol | 62.5 | 51.55 |
| PGSC0003DMT400067154 | Potato | cytosol | 61.25 | 46.67 |
| Bra000682.1-P | Field mustard | cytosol | 51.25 | 41.84 |
| CDX90724 | Canola | cytosol | 51.25 | 41.84 |
| CDY05061 | Canola | cytosol | 51.25 | 41.84 |
| AT4G09530.1 | Thale cress | cytosol | 48.75 | 37.86 |
| VIT_18s0001g13980.t01 | Wine grape | mitochondrion | 46.25 | 35.58 |
| VIT_03s0038g00950.t01 | Wine grape | mitochondrion | 43.75 | 33.65 |
| VIT_04s0023g03230.t01 | Wine grape | mitochondrion | 41.25 | 31.73 |
| VIT_08s0040g01670.t01 | Wine grape | mitochondrion | 35.0 | 22.58 |
Protein Annotations
| EntrezGene:100854912 | wikigene:100854912 | MapMan:35.2 | ProteinID:CCB51332 | ProteinID:CCB51332.1 | UniProt:F6HGI6 |
| EMBL:FN595755 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | EntrezGene:LOC100854912 | wikigene:LOC100854912 |
| PFAM:PF02519 | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF55 | InterPro:SAUR_fam | UniParc:UPI000210AA39 | ArrayExpress:VIT_07s0130g00100 |
| EnsemblPlantsGene:VIT_07s0130g00100 | EnsemblPlants:VIT_07s0130g00100.t01 | RefSeq:XP_003632542 | RefSeq:XP_003632542.1 | : | : |
Description
No Description!
Coordinates
chr7:-:20315247..20315489
Molecular Weight (calculated)
9286.2 Da
IEP (calculated)
8.491
GRAVY (calculated)
-0.471
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MGNKQDSETR RRAPKGHFVV YVGEEMKRFV VPISYLKNPM LQQLLAEAAE EFGFDSQKRI VLPCDESTFQ RITDFMIKST
001: MPHKVIDMHF HEREEEEDTG ESRSSSRTPR GHFVVYVGTK KKLERFVIPT TFLKSPSFQK LLDNAAEEFG YAEAHRDKIV LPCDVSTFRS LVMFLTSHQD
101: KSH
101: KSH
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9M0P0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.