Factsheet for PGSC0003DMT400087067

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004090	Potato	mitochondrion	76.36	80.0
PGSC0003DMT400004089	Potato	cytosol	72.73	79.21
PGSC0003DMT400004187	Potato	mitochondrion	73.64	77.14
VIT_03s0038g00950.t01	Wine grape	mitochondrion	72.73	76.92
PGSC0003DMT400004186	Potato	mitochondrion	64.55	73.96
PGSC0003DMT400068694	Potato	mitochondrion	72.73	73.39
PGSC0003DMT400004165	Potato	mitochondrion	70.0	72.64
KRH39815	Soybean	mitochondrion	68.18	72.12
KRH24349	Soybean	mitochondrion	68.18	71.43
PGSC0003DMT400004167	Potato	mitochondrion	70.0	71.3
GSMUA_Achr1P02500_001	Banana	mitochondrion	63.64	70.71
KRH60748	Soybean	cytosol	66.36	68.87
KRH51448	Soybean	cytosol	66.36	68.87
GSMUA_Achr5P11350_001	Banana	mitochondrion	60.0	67.35
PGSC0003DMT400009665	Potato	mitochondrion	63.64	64.81
GSMUA_Achr11P...	Banana	mitochondrion	59.09	63.11
PGSC0003DMT400075050	Potato	cytosol	54.55	62.5
PGSC0003DMT400058186	Potato	cytosol	55.45	61.0
GSMUA_Achr3P11290_001	Banana	mitochondrion	56.36	60.78
GSMUA_Achr1P06110_001	Banana	mitochondrion	52.73	58.59
PGSC0003DMT400009439	Potato	mitochondrion	52.73	57.43
GSMUA_Achr7P06520_001	Banana	mitochondrion	53.64	57.28
Os02t0445600-01	Rice	cytosol, mitochondrion	49.09	55.67
GSMUA_Achr1P19860_001	Banana	mitochondrion	53.64	55.66
Os02t0445100-01	Rice	mitochondrion	45.45	52.08
Os06t0137400-00	Rice	mitochondrion	49.09	45.38
Zm00001d051802_P001	Maize	mitochondrion	47.27	45.22
TraesCS4A01G375500.1	Wheat	mitochondrion	47.27	43.7
TraesCS7A01G077000.1	Wheat	mitochondrion	47.27	43.33
KXG19242	Sorghum	mitochondrion	49.09	42.52
TraesCS7D01G072600.1	Wheat	mitochondrion	47.27	41.6
Zm00001d045423_P001	Maize	cytosol	47.27	41.6
Zm00001d004578_P001	Maize	plastid	38.18	33.87
PGSC0003DMT400067154	Potato	cytosol	30.91	32.38
Zm00001d012222_P001	Maize	cytosol	40.91	30.0
Zm00001d051962_P001	Maize	cytosol	42.73	29.38
PGSC0003DMT400055533	Potato	cytosol	31.82	28.93
HORVU7Hr1G017790.1	Barley	extracellular, mitochondrion, plastid	46.36	28.33
PGSC0003DMT400080544	Potato	cytosol	30.91	27.87
Zm00001d008420_P001	Maize	cytosol	33.64	15.74
Zm00001d021237_P001	Maize	cytosol	35.45	13.73
Zm00001d033729_P001	Maize	nucleus	38.18	11.48
Zm00001d027753_P001	Maize	nucleus	32.73	8.51
Zm00001d053311_P001	Maize	nucleus	17.27	5.56

Protein Annotations

EnsemblPlants:PGSC0003DMT400087067	EnsemblPlantsGene:PGSC0003DMG400036638	EntrezGene:102604002	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF2	PFAM:PF02519	PGSC:PGSC0003DMG400036638	RefSeq:XP_006359709.1
UniParc:UPI0002969FA8	UniProt:M1DD34	MapMan:35.1	:	:	:

Description

SAUR9-auxin-responsive SAUR family member [Source:PGSC_GENE;Acc:PGSC0003DMG400036638]

Coordinates

chr1:+:86992768..86993100

Molecular Weight (calculated)

12968.8 Da

IEP (calculated)

7.958

GRAVY (calculated)

-0.284

Length

110 amino acids

Sequence
(BLAST)

001: MAITRKSNYK LPQVAVLKQI MKRCWSLGKK LNGYKYNDKD YTPIDVPKEH FVVYVGEDKT RYIVPIFFLS HPEFQCLLRC AEEEFGFDHD KGITIPCEEF
101: IFQSLTSMIH

Best Arabidopsis Sequence Match ( AT4G34760.1 )
(BLAST)

001: MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ
101: TLTSMIR

Arabidopsis Description

SAUR50Auxin-responsive protein SAUR50 [Source:UniProtKB/Swiss-Prot;Acc:O65695]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.