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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • nucleus 1
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G048110.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G10760.1 HORVU7Hr1G048110.2 AT3G54170.1 18505803
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G254900.1 Wheat nucleus 93.07 97.58
TraesCS6D01G236200.1 Wheat nucleus 92.39 96.87
TraesCS6B01G270600.1 Wheat nucleus 90.49 95.69
EES07469 Sorghum cytosol 78.8 82.15
Os02t0672600-01 Rice nucleus 78.12 81.44
Zm00001d017566_P001 Maize extracellular 77.58 81.11
CDY53519 Canola mitochondrion 46.74 64.91
Bra035280.1-P Field mustard mitochondrion 46.88 64.85
GSMUA_Achr11P... Banana nucleus 53.53 64.27
GSMUA_Achr8P11830_001 Banana nucleus 60.46 62.68
AT4G10760.1 Thale cress cytosol 53.12 57.08
VIT_02s0025g02400.t01 Wine grape nucleus 58.15 56.02
Solyc08g066730.2.1 Tomato nucleus 56.11 55.89
PGSC0003DMT400011022 Potato cytosol, nucleus, plastid 55.57 55.35
CDX86845 Canola nucleus 47.42 53.94
KRH06595 Soybean cytosol, nucleus, plastid 54.21 52.43
KRH48077 Soybean nucleus 54.21 52.36
HORVU4Hr1G079900.1 Barley nucleus 16.3 14.87
Protein Annotations
MapMan:16.5.1.1.1UniProt:A0A287UGA3GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005654GO:GO:0005737GO:GO:0006139GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0016607
GO:GO:0016740GO:GO:0080009EnsemblPlantsGene:HORVU6Hr1G064940EnsemblPlants:HORVU6Hr1G064940.1InterPro:IPR007757InterPro:MT-A70-like
PFAM:PF05063PFscan:PS51143PANTHER:PTHR12829PANTHER:PTHR12829:SF2InterPro:SAM-dependent_MTasesSUPFAM:SSF53335
UniParc:UPI000B467F97SEG:seg::::
Description
No Description!
Coordinates
chrchr6H:+:444692921..444698534
Molecular Weight (calculated)
81444.8 Da
IEP (calculated)
8.179
GRAVY (calculated)
-0.474
Length
736 amino acids
Sequence
(BLAST)
001: LTLSTNSTGL RVHVTSPQRA RSKTSNLFLA PKSKTMETKA DVAAGGGDDL ATMREQCRSM EEAISFRREA QLGLVGSLQH LVPDLVPSLD RSLRLIAAFN
101: DRPFTPTPNP NACDPQNPSL KPHHRRAVPD PARSTRRKTS PGSSPASATV GGAAPGGLDA VRTMVAVFLL ELIPFAEIDA AVLARRLQAE TSSASDAERA
201: ALADLATELG GSVPAAVALA LRRIAEDSGG VQIEEAMIGG KQMMMVWAID RSKLLKELPE SATLLSPQPP PIPQATSSET DTNSATIPRP PPHQQQQPDM
301: WAHSMPPMFP RPRGMTMPGM QRMMPGLMPL QRPFMAPSSG PSPTKQNQRT EEEDLKDLEV LLSKKTYKEK QNTKTGEELL DLIHRPTAKE TAVAAKFKTK
401: GGSQLKEYCT NLTKEDCRRQ SGSFVSCAKV HFRRIIALHT DTNLGDCSFL DTCRHTKTCK YVHYELDQTP DIAPMMAGTL APPRQIKPHR AEYCSEIELG
501: ESQWINCDIR NFRMDILGQF GVIMADPPWD IHMELPYGTM ADDEMRTLNV PALQTDGLIF LWVTGRAMEL GRECLELWGY KRVEEIIWVK TNQLQRIIRT
601: GRTGHWLNHS KEHCLVGIKG SPLVNRNIDT DVIVAEVRET SRKPDEMYAM LERISPRTRK LELFARMHNT QAGWLSLGNQ VSGTRLVDEG LRARYKAAYP
701: DFEVQPPSPP RATAPMDVDQ STPSQKPVAS DGERPA
Best Arabidopsis Sequence Match ( AT4G10760.1 )
(BLAST)
001: METESDDATI TVVKDMRVRL ENRIRTQHDA HLDLLSSLQS IVPDIVPSLD LSLKLISSFT NRPFVATPPL PEPKVEKKHH PIVKLGTQLQ QLHGHDSKSM
101: LVDSNQRDAE ADGSSGSPMA LVRAMVAECL LQRVPFSPTD SSTVLRKLEN DQNARPAEKA ALRDLGGECG PILAVETALK SMAEENGSVE LEEFEVSGKP
201: RIMVLAIDRT RLLKELPESF QGNNESNRVV ETPNSIENAT VSGGGFGVSG SGNFPRPEMW GGDPNMGFRP MMNAPRGMQM MGMHHPMGIM GRPPPFPLPL
301: PLPVPSNQKL RSEEEDLKDV EALLSKKSFK EKQQSRTGEE LLDLIHRPTA KEAATAAKFK SKGGSQVKYY CRYLTKEDCR LQSGSHIACN KRHFRRLIAS
401: HTDVSLGDCS FLDTCRHMKT CKYVHYELDM ADAMMAGPDK ALKPLRADYC SEAELGEAQW INCDIRSFRM DILGTFGVVM ADPPWDIHME LPYGTMADDE
501: MRTLNVPSLQ TDGLIFLWVT GRAMELGREC LELWGYKRVE EIIWVKTNQL QRIIRTGRTG HWLNHSKEHC LVGIKGNPEV NRNIDTDVIV AEVRETSRKP
601: DEMYAMLERI MPRARKLELF ARMHNAHAGW LSLGNQLNGV RLINEGLRAR FKASYPEIDV QPPSPPRASA METDNEPMAI DSITA
Arabidopsis Description
MTAN6-adenosine-methyltransferase MT-A70-like [Source:UniProtKB/Swiss-Prot;Acc:O82486]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.