Factsheet for Solyc08g066730.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g112520.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G10760.1	Solyc03g112520.2.1	AT3G54170.1	18505803

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011022	Potato	cytosol, nucleus, plastid	97.83	97.83
CDY53519	Canola	mitochondrion	51.42	71.7
Bra035280.1-P	Field mustard	mitochondrion	51.42	71.43
VIT_02s0025g02400.t01	Wine grape	nucleus	70.09	67.8
KRH48077	Soybean	nucleus	67.79	65.75
KRH06595	Soybean	cytosol, nucleus, plastid	67.25	65.31
AT4G10760.1	Thale cress	cytosol	59.4	64.09
GSMUA_Achr11P...	Banana	nucleus	52.64	63.46
GSMUA_Achr8P11830_001	Banana	nucleus	60.49	62.96
EES07469	Sorghum	cytosol	58.05	60.76
CDX86845	Canola	nucleus	53.04	60.59
Zm00001d017566_P001	Maize	extracellular	57.37	60.23
Os02t0672600-01	Rice	nucleus	57.51	60.2
TraesCS6B01G270600.1	Wheat	nucleus	55.48	58.91
TraesCS6A01G254900.1	Wheat	nucleus	55.89	58.83
TraesCS6D01G236200.1	Wheat	nucleus	55.89	58.83
HORVU6Hr1G064940.1	Barley	mitochondrion	55.89	56.11
Solyc05g056220.2.1	Tomato	nucleus	16.91	11.46
Solyc05g056210.2.1	Tomato	nucleus	16.24	10.97

Protein Annotations

MapMan:16.5.1.1.1	ncoils:Coil	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005737	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016422	GO:GO:0016607	GO:GO:0016740	GO:GO:0036396	GO:GO:0080009	InterPro:IPR007757
UniProt:K4CLP9	InterPro:MT-A70-like	PFAM:PF05063	PFscan:PS51143	PANTHER:PTHR12829	PANTHER:PTHR12829:SF2
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc08g066730.2	EnsemblPlants:Solyc08g066730.2.1	UniParc:UPI000276BEA7	SEG:seg

Description

N6-adenosine-methyltransferase MT-A70-like [Source:Projected from Arabidopsis thaliana (AT4G10760) UniProtKB/Swiss-Prot;Acc:O82486]

Coordinates

chr8:+:55549874..55557863

Molecular Weight (calculated)

81479.2 Da

IEP (calculated)

6.876

GRAVY (calculated)

-0.434

Length

739 amino acids

Sequence
(BLAST)

001: METHADGTDE IAAVEELRQQ HETRIQTLHN AQLELIASLQ NIVPDIVSSL DLSLKTISAF NGKPFTPLPS PLPNAPNHNP NLLVPKINSC SGKRVSELSR
101: SGSEKEKMVI DECGGPLSVV RAMVAVCLLE RVPFTAIDSS TLLRKLENDQ SHTAAEKAAI RELGGESGAI VAVEMALKSM AEDNGCVELE NFVVSGKSRI
201: MVLNIDRTRL LKELPESKQT EGSVGGGNRN NQEIMKRGID NGGAFGMGRG MSEMWEHPHM QGMTAMFPGN MGGPRGGHRG MVGMMGMPRG VGVPPPMHRP
301: PMGPNGQIGG GGNSIALKPR SEEDELKDLE KMLNKKSFKE MQKSKTGEEL LDLIHRPTAK ESAVAAKFKS KGGSQVKEYC SALTKEDCRR QAGSYIACDK
401: VHFRRIIAVH TDVNLGDCSF LDTCRHMKTC KYVHYELDST PDVSPLMMGA STLAPPKPLK PQRAHYCSEV ELGEPQWINC DIRSFRMDIL GQFGVIMADP
501: PWDIHMELPY GTMADDEMRT LNVPALQTDG LIFLWVTGRA MELGRECLEL WGYKRVEEII WVKTNQLQRI IRTGRTGHWL NHSKEHCLVG IKGNPEVNRN
601: IDTDVIVAEV RETSRKPDEM YPLLERISPR TRKLELFARM HNVHGGWMSL GNQLQGVRLV DEGLRARFKA AYPDVEVQPA SPPRPSAMEV DSSSNQIRNT
701: FAGGELKAAG TQVTEATPPD AAAYATEGKP VNRDVEMTS

Best Arabidopsis Sequence Match ( AT4G10760.1 )
(BLAST)

001: METESDDATI TVVKDMRVRL ENRIRTQHDA HLDLLSSLQS IVPDIVPSLD LSLKLISSFT NRPFVATPPL PEPKVEKKHH PIVKLGTQLQ QLHGHDSKSM
101: LVDSNQRDAE ADGSSGSPMA LVRAMVAECL LQRVPFSPTD SSTVLRKLEN DQNARPAEKA ALRDLGGECG PILAVETALK SMAEENGSVE LEEFEVSGKP
201: RIMVLAIDRT RLLKELPESF QGNNESNRVV ETPNSIENAT VSGGGFGVSG SGNFPRPEMW GGDPNMGFRP MMNAPRGMQM MGMHHPMGIM GRPPPFPLPL
301: PLPVPSNQKL RSEEEDLKDV EALLSKKSFK EKQQSRTGEE LLDLIHRPTA KEAATAAKFK SKGGSQVKYY CRYLTKEDCR LQSGSHIACN KRHFRRLIAS
401: HTDVSLGDCS FLDTCRHMKT CKYVHYELDM ADAMMAGPDK ALKPLRADYC SEAELGEAQW INCDIRSFRM DILGTFGVVM ADPPWDIHME LPYGTMADDE
501: MRTLNVPSLQ TDGLIFLWVT GRAMELGREC LELWGYKRVE EIIWVKTNQL QRIIRTGRTG HWLNHSKEHC LVGIKGNPEV NRNIDTDVIV AEVRETSRKP
601: DEMYAMLERI MPRARKLELF ARMHNAHAGW LSLGNQLNGV RLINEGLRAR FKASYPEIDV QPPSPPRASA METDNEPMAI DSITA

Arabidopsis Description

MTAN6-adenosine-methyltransferase MT-A70-like [Source:UniProtKB/Swiss-Prot;Acc:O82486]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.