Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
18203134
extracellular: 28232208 |
msms PMID:
18203134
doi
Department of Biochemistry and Molecular Biology, Mississippi State University, Mississippi State, MS 39762, USA.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os06t0474200-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G10760.1 | Os06t0474200-01 | AT3G54170.1 | 18505803 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G254900.1 | Wheat | nucleus | 82.72 | 83.19 |
| TraesCS6B01G270600.1 | Wheat | nucleus | 81.59 | 82.76 |
| TraesCS6D01G236200.1 | Wheat | nucleus | 82.01 | 82.48 |
| EES07469 | Sorghum | cytosol | 82.29 | 82.29 |
| Zm00001d017566_P001 | Maize | extracellular | 81.16 | 81.39 |
| HORVU6Hr1G064940.1 | Barley | mitochondrion | 81.44 | 78.12 |
| GSMUA_Achr11P... | Banana | nucleus | 58.36 | 67.21 |
| CDY53519 | Canola | mitochondrion | 49.29 | 65.66 |
| Bra035280.1-P | Field mustard | mitochondrion | 49.43 | 65.6 |
| GSMUA_Achr8P11830_001 | Banana | nucleus | 65.16 | 64.79 |
| VIT_02s0025g02400.t01 | Wine grape | nucleus | 63.31 | 58.51 |
| Solyc08g066730.2.1 | Tomato | nucleus | 60.2 | 57.51 |
| PGSC0003DMT400011022 | Potato | cytosol, nucleus, plastid | 59.63 | 56.97 |
| AT4G10760.1 | Thale cress | cytosol | 54.82 | 56.5 |
| KRH48077 | Soybean | nucleus | 59.07 | 54.72 |
| KRH06595 | Soybean | cytosol, nucleus, plastid | 58.92 | 54.66 |
| CDX86845 | Canola | nucleus | 49.86 | 54.4 |
| Os01t0267100-01 | Rice | nucleus | 17.42 | 16.1 |
| Os03t0147700-01 | Rice | nucleus | 14.31 | 14.92 |
| Os10t0447600-01 | Rice | nucleus | 18.41 | 12.83 |
Protein Annotations
| MapMan:16.5.1.1.1 | EntrezGene:4330284 | EMBL:AK070286 | EMBL:AK101174 | ProteinID:BAD27818.1 | ProteinID:BAD27860.1 |
| ProteinID:BAF09621.1 | ProteinID:BAS80247.1 | GO:GO:0001510 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005654 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016422 | GO:GO:0016607 | GO:GO:0016740 |
| GO:GO:0032259 | GO:GO:0036396 | GO:GO:0080009 | InterPro:IPR007757 | InterPro:MT-A70-like | EnsemblPlantsGene:Os02g0672600 |
| EnsemblPlants:Os02t0672600-01 | PFAM:PF05063 | PFscan:PS51143 | PANTHER:PTHR12829 | PANTHER:PTHR12829:SF2 | UniProt:Q6EU10 |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI00003CE50B | RefSeq:XP_015625439.1 | SEG:seg | : |
Description
Similar to N6-adenosine-methyltransferase 70 kDa subunit (EC 2.1.1.62) (MT-A70) (Methyltransferase-like protein 3). Splice isoform 2. (Os02t0672600-01)
Coordinates
chr2:+:27360447..27365739
Molecular Weight (calculated)
77807.6 Da
IEP (calculated)
7.188
GRAVY (calculated)
-0.456
Length
706 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAQADAGGD DLAAMREQCR SLEEAIGFRR ETQMGLVASL QRLVPDLVPS LDRSLRIIAA FNDRPFVPTP NPDGGHGKSP AALKPHHRRA LPDPARSTRR
101: KTSPGSSPAS VAAAPGGLDA VRTMVAVCLL ELVPFAEIDA AALARRLQAE SSSASEAERT ALADLAAELG GSAASAVVLA LRRIAEDTGG VQIEEAMIGG
201: KSMTMVWAID RNKLLKELPE SATLPLLQPP PAPQMPPSET DAGSAMIPRT PQQQQPQPDM WPHSMPPIFP RPRGMTMQGM QRVPGVPPGL MPLQRPFMGP
301: AGVITMGGGV GPSPNQQKQK SEEDELKDLE LLLNKKTYRE KQNTKTGEEL LDLIHRPTAK ETAVAAKFKT KGGSQLKEYC TNLTKEDCRR QSGSFVACDK
401: VHFRRIIAPH TDTNLGDCSF LDTCRHTKTC KYVHYELDQT PDIPPMMAGA LAPPRQIRLQ RAEYCSEVEL GEAQWINCDI RNFRMDILGQ FGVIMADPPW
501: DIHMELPYGT MADDEMRTLN VPALQTDGLI FLWVTGRAME LGRECLELWG YKRVEEIIWV KTNQLQRIIR TGRTGHWLNH SKEHCLVGIK GNPLVNRNID
601: TDVIVAEVRE TSRKPDEMYP MLERISPRTR KLELFARMHN AHAGWLSLGN QLNGVRLVDE GLRARYKAAY PDSEVQPPSP PRASAPIDGD QGTSQKPTVS
701: DGERPA
101: KTSPGSSPAS VAAAPGGLDA VRTMVAVCLL ELVPFAEIDA AALARRLQAE SSSASEAERT ALADLAAELG GSAASAVVLA LRRIAEDTGG VQIEEAMIGG
201: KSMTMVWAID RNKLLKELPE SATLPLLQPP PAPQMPPSET DAGSAMIPRT PQQQQPQPDM WPHSMPPIFP RPRGMTMQGM QRVPGVPPGL MPLQRPFMGP
301: AGVITMGGGV GPSPNQQKQK SEEDELKDLE LLLNKKTYRE KQNTKTGEEL LDLIHRPTAK ETAVAAKFKT KGGSQLKEYC TNLTKEDCRR QSGSFVACDK
401: VHFRRIIAPH TDTNLGDCSF LDTCRHTKTC KYVHYELDQT PDIPPMMAGA LAPPRQIRLQ RAEYCSEVEL GEAQWINCDI RNFRMDILGQ FGVIMADPPW
501: DIHMELPYGT MADDEMRTLN VPALQTDGLI FLWVTGRAME LGRECLELWG YKRVEEIIWV KTNQLQRIIR TGRTGHWLNH SKEHCLVGIK GNPLVNRNID
601: TDVIVAEVRE TSRKPDEMYP MLERISPRTR KLELFARMHN AHAGWLSLGN QLNGVRLVDE GLRARYKAAY PDSEVQPPSP PRASAPIDGD QGTSQKPTVS
701: DGERPA
001: METESDDATI TVVKDMRVRL ENRIRTQHDA HLDLLSSLQS IVPDIVPSLD LSLKLISSFT NRPFVATPPL PEPKVEKKHH PIVKLGTQLQ QLHGHDSKSM
101: LVDSNQRDAE ADGSSGSPMA LVRAMVAECL LQRVPFSPTD SSTVLRKLEN DQNARPAEKA ALRDLGGECG PILAVETALK SMAEENGSVE LEEFEVSGKP
201: RIMVLAIDRT RLLKELPESF QGNNESNRVV ETPNSIENAT VSGGGFGVSG SGNFPRPEMW GGDPNMGFRP MMNAPRGMQM MGMHHPMGIM GRPPPFPLPL
301: PLPVPSNQKL RSEEEDLKDV EALLSKKSFK EKQQSRTGEE LLDLIHRPTA KEAATAAKFK SKGGSQVKYY CRYLTKEDCR LQSGSHIACN KRHFRRLIAS
401: HTDVSLGDCS FLDTCRHMKT CKYVHYELDM ADAMMAGPDK ALKPLRADYC SEAELGEAQW INCDIRSFRM DILGTFGVVM ADPPWDIHME LPYGTMADDE
501: MRTLNVPSLQ TDGLIFLWVT GRAMELGREC LELWGYKRVE EIIWVKTNQL QRIIRTGRTG HWLNHSKEHC LVGIKGNPEV NRNIDTDVIV AEVRETSRKP
601: DEMYAMLERI MPRARKLELF ARMHNAHAGW LSLGNQLNGV RLINEGLRAR FKASYPEIDV QPPSPPRASA METDNEPMAI DSITA
101: LVDSNQRDAE ADGSSGSPMA LVRAMVAECL LQRVPFSPTD SSTVLRKLEN DQNARPAEKA ALRDLGGECG PILAVETALK SMAEENGSVE LEEFEVSGKP
201: RIMVLAIDRT RLLKELPESF QGNNESNRVV ETPNSIENAT VSGGGFGVSG SGNFPRPEMW GGDPNMGFRP MMNAPRGMQM MGMHHPMGIM GRPPPFPLPL
301: PLPVPSNQKL RSEEEDLKDV EALLSKKSFK EKQQSRTGEE LLDLIHRPTA KEAATAAKFK SKGGSQVKYY CRYLTKEDCR LQSGSHIACN KRHFRRLIAS
401: HTDVSLGDCS FLDTCRHMKT CKYVHYELDM ADAMMAGPDK ALKPLRADYC SEAELGEAQW INCDIRSFRM DILGTFGVVM ADPPWDIHME LPYGTMADDE
501: MRTLNVPSLQ TDGLIFLWVT GRAMELGREC LELWGYKRVE EIIWVKTNQL QRIIRTGRTG HWLNHSKEHC LVGIKGNPEV NRNIDTDVIV AEVRETSRKP
601: DEMYAMLERI MPRARKLELF ARMHNAHAGW LSLGNQLNGV RLINEGLRAR FKASYPEIDV QPPSPPRASA METDNEPMAI DSITA
Arabidopsis Description
MTAN6-adenosine-methyltransferase MT-A70-like [Source:UniProtKB/Swiss-Prot;Acc:O82486]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.