CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH03247
KRH54345
KRH57111
KRH63594

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G10760.1	KRH03247	AT3G54170.1	18505803
AT4G10760.1	KRH54345	AT3G54170.1	18505803
AT4G10760.1	KRH57111	AT3G54170.1	18505803
AT4G10760.1	KRH63594	AT3G54170.1	18505803

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48077	Soybean	nucleus	92.51	92.39
CDY53519	Canola	mitochondrion	49.28	70.75
Bra035280.1-P	Field mustard	mitochondrion	49.01	70.11
Solyc08g066730.2.1	Tomato	nucleus	65.31	67.25
PGSC0003DMT400011022	Potato	cytosol, nucleus, plastid	65.31	67.25
VIT_02s0025g02400.t01	Wine grape	nucleus	67.41	67.15
AT4G10760.1	Thale cress	cytosol	56.37	62.63
GSMUA_Achr11P...	Banana	nucleus	50.07	62.15
GSMUA_Achr8P11830_001	Banana	nucleus	57.69	61.83
CDX86845	Canola	nucleus	51.51	60.59
Os02t0672600-01	Rice	nucleus	54.66	58.92
EES07469	Sorghum	cytosol	53.75	57.93
Zm00001d017566_P001	Maize	extracellular	53.35	57.67
TraesCS6A01G254900.1	Wheat	nucleus	52.56	56.98
TraesCS6D01G236200.1	Wheat	nucleus	52.56	56.98
TraesCS6B01G270600.1	Wheat	nucleus	52.04	56.9
HORVU6Hr1G064940.1	Barley	mitochondrion	52.43	54.21
KRG91570	Soybean	nucleus	17.74	12.3
KRH35254	Soybean	nucleus	17.35	11.98

Protein Annotations

EntrezGene:100782695	MapMan:16.5.1.1.1	EMBL:ACUP02009851	ncoils:Coil	EnsemblPlantsGene:GLYMA_16G033100	GO:GO:0001510
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005654	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016422	GO:GO:0016607	GO:GO:0016740	GO:GO:0036396	GO:GO:0080009
UniProt:I1MKT1	InterPro:IPR007757	EnsemblPlants:KRH06595	ProteinID:KRH06595	ProteinID:KRH06595.1	InterPro:MT-A70-like
PFAM:PF05063	PFscan:PS51143	PANTHER:PTHR12829	PANTHER:PTHR12829:SF2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI00023D6E43	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:3127716..3133331

Molecular Weight (calculated)

84268.8 Da

IEP (calculated)

6.324

GRAVY (calculated)

-0.465

Length

761 amino acids

Sequence
(BLAST)

001: METQSDGNED TIAAIKDMRQ QLEARIESQH KAHMEMLASM QTVIPNLVSS LDLSLKVVSS FNHRPFAPTP SLPQPDPKLN PRKLVELTHR SNAETFTDGS
101: IEADLTNPKN QKPKTSMDSN SACQVDSEKV SPLAVVRSMV AVCLLGRVPF SPIDSSTVSR KLENDQTVTP TEKAALQELG GDSGATLAVE IALRAMADDN
201: GGVEVEEFVV SGKARIMVLN IDRTRILREL PESVQYQQLE SSSGDGNANQ NQVQQITHSG PNVNGSLLGM GRPVLRPMSD MWIPHGDPHM SALQPMFSGG
301: PRGAPRLMGM MGAHRGISIP SMHRLPLGPN APGSSPNAMP QKPRSFDDDM KDLEALLNKK SFREMQKSKT GEELLDLIHR PTAKETAVAA KFKTKGGSQV
401: RQYCDLLTKE DCRRQTGSFI ACDKVHFRRI IAPHTDINLG DCSFLDTCRH MKTCKYVHYE YDPTPDVSPT MMGAPPPPKP LKPQRAEYCS EVELGEPQWI
501: NCDIRNFRMD ILGQFGVIMA DPPWDIHMEL PYGTMADDEM RSLNVPALQT DGLIFLWVTG RAMELGRECL ELWGYKRVEE IIWVKTNQLQ RIIRTGRTGH
601: WLNHSKEHCL VGIKGDPEVN RNIDTDVIVA EVRETSRKPD EMYPMLERIS PGTRKLELFA RMHNTHAGWM SLGNQLSGVR LVDEGLRARF KAAYPDVEVQ
701: PASPPRASAM EVDTSVAAHS RSPFSATESK STSTQFAEPA AAPETAFVSE DKPLAIDVDI G

Best Arabidopsis Sequence Match ( AT4G10760.1 )
(BLAST)

001: METESDDATI TVVKDMRVRL ENRIRTQHDA HLDLLSSLQS IVPDIVPSLD LSLKLISSFT NRPFVATPPL PEPKVEKKHH PIVKLGTQLQ QLHGHDSKSM
101: LVDSNQRDAE ADGSSGSPMA LVRAMVAECL LQRVPFSPTD SSTVLRKLEN DQNARPAEKA ALRDLGGECG PILAVETALK SMAEENGSVE LEEFEVSGKP
201: RIMVLAIDRT RLLKELPESF QGNNESNRVV ETPNSIENAT VSGGGFGVSG SGNFPRPEMW GGDPNMGFRP MMNAPRGMQM MGMHHPMGIM GRPPPFPLPL
301: PLPVPSNQKL RSEEEDLKDV EALLSKKSFK EKQQSRTGEE LLDLIHRPTA KEAATAAKFK SKGGSQVKYY CRYLTKEDCR LQSGSHIACN KRHFRRLIAS
401: HTDVSLGDCS FLDTCRHMKT CKYVHYELDM ADAMMAGPDK ALKPLRADYC SEAELGEAQW INCDIRSFRM DILGTFGVVM ADPPWDIHME LPYGTMADDE
501: MRTLNVPSLQ TDGLIFLWVT GRAMELGREC LELWGYKRVE EIIWVKTNQL QRIIRTGRTG HWLNHSKEHC LVGIKGNPEV NRNIDTDVIV AEVRETSRKP
601: DEMYAMLERI MPRARKLELF ARMHNAHAGW LSLGNQLNGV RLINEGLRAR FKASYPEIDV QPPSPPRASA METDNEPMAI DSITA

Arabidopsis Description

MTAN6-adenosine-methyltransferase MT-A70-like [Source:UniProtKB/Swiss-Prot;Acc:O82486]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.