Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G234600.1 | |
| TraesCS7B01G132800.1 | |
| TraesCS7D01G234600.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G10760.1 | TraesCS7A01G234600.1 | AT3G54170.1 | 18505803 |
| AT4G10760.1 | TraesCS7B01G132800.1 | AT3G54170.1 | 18505803 |
| AT4G10760.1 | TraesCS7D01G234600.1 | AT3G54170.1 | 18505803 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G254900.1 | Wheat | nucleus | 97.27 | 96.44 |
| TraesCS6D01G236200.1 | Wheat | nucleus | 96.7 | 95.87 |
| HORVU6Hr1G064940.1 | Barley | mitochondrion | 95.69 | 90.49 |
| Os02t0672600-01 | Rice | nucleus | 82.76 | 81.59 |
| EES07469 | Sorghum | cytosol | 82.47 | 81.3 |
| Zm00001d017566_P001 | Maize | extracellular | 80.89 | 79.97 |
| CDY53519 | Canola | mitochondrion | 49.57 | 65.09 |
| Bra035280.1-P | Field mustard | mitochondrion | 49.71 | 65.04 |
| GSMUA_Achr11P... | Banana | nucleus | 56.47 | 64.11 |
| GSMUA_Achr8P11830_001 | Banana | nucleus | 62.93 | 61.69 |
| AT4G10760.1 | Thale cress | cytosol | 56.18 | 57.08 |
| VIT_02s0025g02400.t01 | Wine grape | nucleus | 61.21 | 55.76 |
| Solyc08g066730.2.1 | Tomato | nucleus | 58.91 | 55.48 |
| PGSC0003DMT400011022 | Potato | cytosol, nucleus, plastid | 58.33 | 54.94 |
| CDX86845 | Canola | nucleus | 50.29 | 54.1 |
| KRH48077 | Soybean | nucleus | 57.04 | 52.1 |
| KRH06595 | Soybean | cytosol, nucleus, plastid | 56.9 | 52.04 |
| TraesCS4B01G314000.1 | Wheat | nucleus | 17.82 | 15.46 |
Protein Annotations
| MapMan:16.5.1.1.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016607 | GO:GO:0080009 | InterPro:IPR007757 | InterPro:MT-A70-like | PFAM:PF05063 |
| PFscan:PS51143 | PANTHER:PTHR12829 | PANTHER:PTHR12829:SF2 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS6B01G270600 |
| EnsemblPlants:TraesCS6B01G270600.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:487534568..487541541
Molecular Weight (calculated)
77185.7 Da
IEP (calculated)
7.074
GRAVY (calculated)
-0.464
Length
696 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKADVAAD LSTMREQCRS MEEVISFRRE AQLGLVGSLQ HLVPDLVPSL DRSLRLIAAF NDRPFTPTPN PNAGDPQNPS LKSHHRRAIP DPARSTRRKT
101: SPGSSPASAA VGGAAPGGLD AVRTMVAVFL LELIPFAEID AAVLARRLQA ESSSASDAER AALADLATEL GGSVPAAVAL ALRRIAEDSG GVQIEEAMIG
201: GKQMMMVWAI DRSKLLKELP ESATLLSPQP PPLPQATETD TNSAIIPRPP PPHQQQQPDM WAHSMPPMFP RPRGMTMPGM QRMMPGLMPL QRPFMAPSSG
301: PSPTQQNQRT EEEDLKDLEV LLSKKTYKEK QNTKTGEELL DLIHRPTAKE TAVAAKFKTK GGSQLKEYCT NLTKEDCRRQ SGSFVSCAKV HFRRIIAPHT
401: DTNLGDCSFL DTCRHTKTCK YVHYELDQTP DIAPMMAGTL APPRQIKPHR AEYCSEIELG ESQWINCDIR NFRMDILGQF GVIMADPPWD IHMELPYGTM
501: ADDEMRTLNV PALQTDGLIF LWVTGRAMEL GRECLELWGY KRVEEIIWVK TNQLQRIIRT GRTGHWLNHS KEHCLVGIKG SPLVNRNIDT DVIVAEVRET
601: SRKPDEMYAM LERISPRTRK LELFARMHNT QAGWLSLGNQ VSGTRLVDEG LRATYKAAYP DFEVQPPSPP RASAPMDVDQ STPSQKPVAS DGERPT
101: SPGSSPASAA VGGAAPGGLD AVRTMVAVFL LELIPFAEID AAVLARRLQA ESSSASDAER AALADLATEL GGSVPAAVAL ALRRIAEDSG GVQIEEAMIG
201: GKQMMMVWAI DRSKLLKELP ESATLLSPQP PPLPQATETD TNSAIIPRPP PPHQQQQPDM WAHSMPPMFP RPRGMTMPGM QRMMPGLMPL QRPFMAPSSG
301: PSPTQQNQRT EEEDLKDLEV LLSKKTYKEK QNTKTGEELL DLIHRPTAKE TAVAAKFKTK GGSQLKEYCT NLTKEDCRRQ SGSFVSCAKV HFRRIIAPHT
401: DTNLGDCSFL DTCRHTKTCK YVHYELDQTP DIAPMMAGTL APPRQIKPHR AEYCSEIELG ESQWINCDIR NFRMDILGQF GVIMADPPWD IHMELPYGTM
501: ADDEMRTLNV PALQTDGLIF LWVTGRAMEL GRECLELWGY KRVEEIIWVK TNQLQRIIRT GRTGHWLNHS KEHCLVGIKG SPLVNRNIDT DVIVAEVRET
601: SRKPDEMYAM LERISPRTRK LELFARMHNT QAGWLSLGNQ VSGTRLVDEG LRATYKAAYP DFEVQPPSPP RASAPMDVDQ STPSQKPVAS DGERPT
001: METESDDATI TVVKDMRVRL ENRIRTQHDA HLDLLSSLQS IVPDIVPSLD LSLKLISSFT NRPFVATPPL PEPKVEKKHH PIVKLGTQLQ QLHGHDSKSM
101: LVDSNQRDAE ADGSSGSPMA LVRAMVAECL LQRVPFSPTD SSTVLRKLEN DQNARPAEKA ALRDLGGECG PILAVETALK SMAEENGSVE LEEFEVSGKP
201: RIMVLAIDRT RLLKELPESF QGNNESNRVV ETPNSIENAT VSGGGFGVSG SGNFPRPEMW GGDPNMGFRP MMNAPRGMQM MGMHHPMGIM GRPPPFPLPL
301: PLPVPSNQKL RSEEEDLKDV EALLSKKSFK EKQQSRTGEE LLDLIHRPTA KEAATAAKFK SKGGSQVKYY CRYLTKEDCR LQSGSHIACN KRHFRRLIAS
401: HTDVSLGDCS FLDTCRHMKT CKYVHYELDM ADAMMAGPDK ALKPLRADYC SEAELGEAQW INCDIRSFRM DILGTFGVVM ADPPWDIHME LPYGTMADDE
501: MRTLNVPSLQ TDGLIFLWVT GRAMELGREC LELWGYKRVE EIIWVKTNQL QRIIRTGRTG HWLNHSKEHC LVGIKGNPEV NRNIDTDVIV AEVRETSRKP
601: DEMYAMLERI MPRARKLELF ARMHNAHAGW LSLGNQLNGV RLINEGLRAR FKASYPEIDV QPPSPPRASA METDNEPMAI DSITA
101: LVDSNQRDAE ADGSSGSPMA LVRAMVAECL LQRVPFSPTD SSTVLRKLEN DQNARPAEKA ALRDLGGECG PILAVETALK SMAEENGSVE LEEFEVSGKP
201: RIMVLAIDRT RLLKELPESF QGNNESNRVV ETPNSIENAT VSGGGFGVSG SGNFPRPEMW GGDPNMGFRP MMNAPRGMQM MGMHHPMGIM GRPPPFPLPL
301: PLPVPSNQKL RSEEEDLKDV EALLSKKSFK EKQQSRTGEE LLDLIHRPTA KEAATAAKFK SKGGSQVKYY CRYLTKEDCR LQSGSHIACN KRHFRRLIAS
401: HTDVSLGDCS FLDTCRHMKT CKYVHYELDM ADAMMAGPDK ALKPLRADYC SEAELGEAQW INCDIRSFRM DILGTFGVVM ADPPWDIHME LPYGTMADDE
501: MRTLNVPSLQ TDGLIFLWVT GRAMELGREC LELWGYKRVE EIIWVKTNQL QRIIRTGRTG HWLNHSKEHC LVGIKGNPEV NRNIDTDVIV AEVRETSRKP
601: DEMYAMLERI MPRARKLELF ARMHNAHAGW LSLGNQLNGV RLINEGLRAR FKASYPEIDV QPPSPPRASA METDNEPMAI DSITA
Arabidopsis Description
MTAN6-adenosine-methyltransferase MT-A70-like [Source:UniProtKB/Swiss-Prot;Acc:O82486]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.