Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G413300.1 | Wheat | nucleus | 97.63 | 98.49 |
| HORVU4Hr1G079900.1 | Barley | nucleus | 95.64 | 95.04 |
| TraesCS4D01G311200.2 | Wheat | nucleus | 98.88 | 89.71 |
| Os01t0267100-01 | Rice | nucleus | 67.96 | 71.34 |
| EER92855 | Sorghum | nucleus | 66.33 | 66.17 |
| Os03t0147700-01 | Rice | nucleus | 54.99 | 65.14 |
| Zm00001d027671_P001 | Maize | nucleus | 65.09 | 64.6 |
| GSMUA_Achr5P10590_001 | Banana | nucleus | 53.49 | 46.73 |
| CDX99517 | Canola | nucleus | 46.88 | 41.32 |
| Bra037896.1-P | Field mustard | nucleus | 47.63 | 40.99 |
| CDX86882 | Canola | nucleus | 46.76 | 40.98 |
| AT4G09980.1 | Thale cress | nucleus | 46.13 | 38.42 |
| Solyc05g056220.2.1 | Tomato | nucleus | 48.38 | 35.56 |
| PGSC0003DMT400059978 | Potato | nucleus | 48.13 | 35.38 |
| Solyc05g056210.2.1 | Tomato | nucleus | 48.01 | 35.19 |
| PGSC0003DMT400059980 | Potato | nucleus | 48.38 | 35.11 |
| KRG91570 | Soybean | nucleus | 47.88 | 34.97 |
| KRH35254 | Soybean | nucleus | 48.01 | 34.94 |
| VIT_16s0050g00820.t01 | Wine grape | nucleus | 49.88 | 32.65 |
| TraesCS6B01G270600.1 | Wheat | nucleus | 15.46 | 17.82 |
Protein Annotations
| MapMan:16.5.1.1.2 | InterPro:DNA_methylase_N6_adenine_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0032259 |
| GO:GO:0080009 | InterPro:IPR007757 | InterPro:MT-A70-like | PFAM:PF05063 | ScanProsite:PS00092 | PFscan:PS51143 |
| PFscan:PS51592 | PANTHER:PTHR13107 | PANTHER:PTHR13107:SF1 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS4B01G314000 |
| EnsemblPlants:TraesCS4B01G314000.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:604048044..604053627
Molecular Weight (calculated)
89054.1 Da
IEP (calculated)
6.572
GRAVY (calculated)
-1.000
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGSKSNAEE DDYHVIGDLR SPKIPRRSPD GSKDRDFDRR EREDRKGWDS SRSETSADMA DTRDGGYSSD HNKHGRETEM IHDHADESGG IRKGVDSSSS
101: RGGRSDEDIN ERRGSAMAEN INEDSRSVDQ SHQKEEILGH TVEYGHESKG GVEKVETSPR VGNDGWESSG DRRNRDAPPS QIPDTPDRGR DSSWNVKTQE
201: VEGSEQYSRS RQLRDPKEAN VSEWRSTQER LDGTSFHGRA GYRQDSRGRS ESFRGSSTYG NRYDRSDSIE IRPNSNFDFG REGSVSGRRS DVGAPGTTDD
301: SSTNHPEADQ SGGTSMVSPF TQQGPKGDRS SRGRGRPNGR DSQRIGVPVP LMPPPSFGAL TLPPGQMQHM GPNIPHSPGP PLLPGVFMPP FPGPMVWPGA
401: GGVDVNMLSV PPNLHIPPPV AGEHRFTPSM GAGPVHNVHL NQMGPGMGTP TNMSGLGFNQ MSTQNREMAH DKPSGGWVPH RHGAPIRKAP SRGEQNDYSQ
501: NFVDTGMRPQ NFIRELDLTS VAEDYPKLRE LIQRKDEIVT NAASPPMYFK CDLRQHVLSP EFFGTKFDVI LVDPPWEEYV HRAPGITDHI EYWNAEEIMN
601: LKIEAIADTP SFLFLWVGDG VGLEQGRQCL KKWGFRRCED VCWVKTNKKN ASSGLRHDSR TLLQHSKEHC LMGIKGTVRR STDGHVIHAN IDTDIIIAEE
701: PTDGSTKKPD DMYRIIEHFA LGKRRLELFG EDHNIRPGWL TLGKDLSYSN FNKEAYNKNF ADSDGKVWQG GGGRNPPPGA PHLIVTTPEI EGLRPKSPPP
801: KN
101: RGGRSDEDIN ERRGSAMAEN INEDSRSVDQ SHQKEEILGH TVEYGHESKG GVEKVETSPR VGNDGWESSG DRRNRDAPPS QIPDTPDRGR DSSWNVKTQE
201: VEGSEQYSRS RQLRDPKEAN VSEWRSTQER LDGTSFHGRA GYRQDSRGRS ESFRGSSTYG NRYDRSDSIE IRPNSNFDFG REGSVSGRRS DVGAPGTTDD
301: SSTNHPEADQ SGGTSMVSPF TQQGPKGDRS SRGRGRPNGR DSQRIGVPVP LMPPPSFGAL TLPPGQMQHM GPNIPHSPGP PLLPGVFMPP FPGPMVWPGA
401: GGVDVNMLSV PPNLHIPPPV AGEHRFTPSM GAGPVHNVHL NQMGPGMGTP TNMSGLGFNQ MSTQNREMAH DKPSGGWVPH RHGAPIRKAP SRGEQNDYSQ
501: NFVDTGMRPQ NFIRELDLTS VAEDYPKLRE LIQRKDEIVT NAASPPMYFK CDLRQHVLSP EFFGTKFDVI LVDPPWEEYV HRAPGITDHI EYWNAEEIMN
601: LKIEAIADTP SFLFLWVGDG VGLEQGRQCL KKWGFRRCED VCWVKTNKKN ASSGLRHDSR TLLQHSKEHC LMGIKGTVRR STDGHVIHAN IDTDIIIAEE
701: PTDGSTKKPD DMYRIIEHFA LGKRRLELFG EDHNIRPGWL TLGKDLSYSN FNKEAYNKNF ADSDGKVWQG GGGRNPPPGA PHLIVTTPEI EGLRPKSPPP
801: KN
001: MKKKQEESSL EKLSTWYQDG EQDGGDRSEK RRMSLKASDF ESSSRSGGSK SKEDNKSVVD VEHQDRDSKR ERDGRERTHG SSSDSSKRKR WDEAGGLVND
101: GDHKSSKLSD SRHDSGGERV SVSNEHGESR RDLKSDRSLK TSSRDEKSKS RGVKDDDRGS PLKKTSGKDG SEVVREVGRS NRSKTPDADY EKEKYSRKDE
201: RSRGRDDGWS DRDRDQEGLK DNWKRRHSSS GDKDQKDGDL LYDRGREREF PRQGRERSEG ERSHGRLGGR KDGNRGEAVK ALSSGGVSNE NYDVIEIQTK
301: PHDYVRGESG PNFARMTESG QQPPKKPSNN EEEWAHNQEG RQRSETFGFG SYGEDSRDEA GEASSDYSGA KARNQRGSTP GRTNFVQTPN RGYQTPQGTR
401: GNRPLRGGKG RPAGGRENQQ GAIPMPIMGS PFANLGMPPP SPIHSLTPGM SPIPGTSVTP VFMPPFAPTL IWPGARGVDG NMLPVPPVLS PLPPGPSGPR
501: FPSIGTPPNP NMFFTPPGSD RGGPPNFPGS NISGQMGRGM PSDKTSGGWV PPRGGGPPGK APSRGEQNDY SQNFVDTGMR PQNFIRELEL TNVEDYPKLR
601: ELIQKKDEIV SNSASAPMYL KGDLHEVELS PELFGTKFDV ILVDPPWEEY VHRAPGVSDS MEYWTFEDII NLKIEAIADT PSFLFLWVGD GVGLEQGRQC
701: LKKWGFRRCE DICWVKTNKS NAAPTLRHDS RTVFQRSKEH CLMGIKGTVR RSTDGHIIHA NIDTDVIIAE EPPYGSTQKP EDMYRIIEHF ALGRRRLELF
801: GEDHNIRAGW LTVGKGLSSS NFEPQAYVRN FADKEGKVWL GGGGRNPPPD APHLVVTTPD IESLRPKSPM KNQQQQSYPS SLASANSSNR RTTGNSPQAN
901: PNVVVLHQEA SGSNFSVPTT PHWVPPTAPA AAGPPPMDSF RVPEGGNNTR PPDDKSFDMY GFN
101: GDHKSSKLSD SRHDSGGERV SVSNEHGESR RDLKSDRSLK TSSRDEKSKS RGVKDDDRGS PLKKTSGKDG SEVVREVGRS NRSKTPDADY EKEKYSRKDE
201: RSRGRDDGWS DRDRDQEGLK DNWKRRHSSS GDKDQKDGDL LYDRGREREF PRQGRERSEG ERSHGRLGGR KDGNRGEAVK ALSSGGVSNE NYDVIEIQTK
301: PHDYVRGESG PNFARMTESG QQPPKKPSNN EEEWAHNQEG RQRSETFGFG SYGEDSRDEA GEASSDYSGA KARNQRGSTP GRTNFVQTPN RGYQTPQGTR
401: GNRPLRGGKG RPAGGRENQQ GAIPMPIMGS PFANLGMPPP SPIHSLTPGM SPIPGTSVTP VFMPPFAPTL IWPGARGVDG NMLPVPPVLS PLPPGPSGPR
501: FPSIGTPPNP NMFFTPPGSD RGGPPNFPGS NISGQMGRGM PSDKTSGGWV PPRGGGPPGK APSRGEQNDY SQNFVDTGMR PQNFIRELEL TNVEDYPKLR
601: ELIQKKDEIV SNSASAPMYL KGDLHEVELS PELFGTKFDV ILVDPPWEEY VHRAPGVSDS MEYWTFEDII NLKIEAIADT PSFLFLWVGD GVGLEQGRQC
701: LKKWGFRRCE DICWVKTNKS NAAPTLRHDS RTVFQRSKEH CLMGIKGTVR RSTDGHIIHA NIDTDVIIAE EPPYGSTQKP EDMYRIIEHF ALGRRRLELF
801: GEDHNIRAGW LTVGKGLSSS NFEPQAYVRN FADKEGKVWL GGGGRNPPPD APHLVVTTPD IESLRPKSPM KNQQQQSYPS SLASANSSNR RTTGNSPQAN
901: PNVVVLHQEA SGSNFSVPTT PHWVPPTAPA AAGPPPMDSF RVPEGGNNTR PPDDKSFDMY GFN
Arabidopsis Description
EMB1691EMB1691 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.