Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86882 | Canola | nucleus | 87.47 | 86.99 |
| AT4G09980.1 | Thale cress | nucleus | 67.03 | 63.34 |
| Os01t0267100-01 | Rice | nucleus | 42.86 | 51.05 |
| EER92855 | Sorghum | nucleus | 42.97 | 48.63 |
| Zm00001d027671_P001 | Maize | nucleus | 42.09 | 47.4 |
| TraesCS4A01G413300.1 | Wheat | nucleus | 40.99 | 46.92 |
| TraesCS4B01G314000.1 | Wheat | nucleus | 41.32 | 46.88 |
| HORVU4Hr1G079900.1 | Barley | nucleus | 41.1 | 46.34 |
| Os03t0147700-01 | Rice | nucleus | 34.18 | 45.94 |
| GSMUA_Achr5P10590_001 | Banana | nucleus | 46.26 | 45.86 |
| TraesCS4D01G311200.2 | Wheat | nucleus | 41.54 | 42.76 |
| KRH35254 | Soybean | nucleus | 51.32 | 42.38 |
| KRG91570 | Soybean | nucleus | 50.66 | 41.99 |
| Solyc05g056220.2.1 | Tomato | nucleus | 50.0 | 41.7 |
| PGSC0003DMT400059978 | Potato | nucleus | 49.78 | 41.52 |
| Os10t0447600-01 | Rice | nucleus | 45.93 | 41.26 |
| PGSC0003DMT400059980 | Potato | nucleus | 49.89 | 41.09 |
| Solyc05g056210.2.1 | Tomato | nucleus | 49.34 | 41.04 |
| VIT_16s0050g00820.t01 | Wine grape | nucleus | 53.52 | 39.76 |
| CDY53519 | Canola | mitochondrion | 10.99 | 18.87 |
| CDX86845 | Canola | nucleus | 12.09 | 17.0 |
Protein Annotations
| MapMan:16.5.1.1.2 | GO:A0A078EER6 | EnsemblPlants:CDX99517 | ProteinID:CDX99517 | ProteinID:CDX99517.1 | ncoils:Coil |
| InterPro:DNA_methylase_N6_adenine_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 | EnsemblPlantsGene:GSBRNA2T00107925001 | InterPro:IPR007757 |
| InterPro:MT-A70-like | PFAM:PF05063 | ScanProsite:PS00092 | PFscan:PS51143 | PFscan:PS51592 | PANTHER:PTHR13107 |
| PANTHER:PTHR13107:SF1 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI0004EAC37E | SEG:seg | : |
Description
BnaC09g24750D
Coordinates
chrLK031911:-:388632..392236
Molecular Weight (calculated)
100903.0 Da
IEP (calculated)
8.212
GRAVY (calculated)
-1.127
Length
910 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKKSEESSL EKLSTWYEDG EQEGGERSEK RRLSAKASEL ESSRSKIKED NKALEEYHDR DKRESGGRDR THGSSSDSSK RRRWDEAAAA DSERGDHNKS
101: SKVSDSERSM KSSSREEKGK TRGIKEDDRD SPLKKGEVGR SSRSKTPDRS GRRHQESEQS EADYDKDRYS RSRGRDDGWS DRDRDQEGWK RRHSSSSDKD
201: QKDGDLHYDR GREREYPRQG RERSEGERSH GRLCGRKDGN RGEAVKALSS GGVSNENYDV IEIQTKPLDG VMNFAQQPPK RPDEDWGYNQ ENRQRSETYG
301: EDSRDEAGEA SSDYSGAKAR NQRGATPGRT NFMQTPNRGP QTPQGGMKGN RPARGGRGRG GGRDNQQGAI QLPIMGPPFA NLGMPPPSPI HSLTPGMSPI
401: PGAPVFMPPF PPALVWPGAR GVDGNMLPVN PVLSPLPPGP SGPRFPSIGT PPNPNMFFNP PGSERGGGPP NFSGSTFNVP GPMGRGMPSS DKNAGGWVPP
501: PRGGGPPGKA PSRGEQNDYS QNFVDTGMRP QNFIRELELT NVEDYPKLRE LIQKKDEIVS NSASAPMYLK GDLHELELSP ELFGTKFDVI LVDPPWEEYV
601: HRAPGVSDTM EYWSFEDIIN LKIEAIADTP SFVFLWVGDG VGLEQGRQCL KKWGFRRCED ICWVKTNKSS AAPTLRHDSR TVFQRSKEHC LMGIKGTVRR
701: STDGHIIHAN IDTDVIIAEE PPYGSTQKPE DMYRIIEHFA LGRRRLELFG EDHNIRAGWL TVGKGLSSSN FESQSFVRNF ADKDGKVWQG GGGRNPPPDA
801: PHLVVTTPDI ESLRPKSPMK NQQQQSYTPS LASSANNSNR RTTGNSPQAN PNVVVLHQEA SGSNFSVPPP HWAPSPATAP PPMESFRVPE GANNNPRPPE
901: DKTFDMYGFN
101: SKVSDSERSM KSSSREEKGK TRGIKEDDRD SPLKKGEVGR SSRSKTPDRS GRRHQESEQS EADYDKDRYS RSRGRDDGWS DRDRDQEGWK RRHSSSSDKD
201: QKDGDLHYDR GREREYPRQG RERSEGERSH GRLCGRKDGN RGEAVKALSS GGVSNENYDV IEIQTKPLDG VMNFAQQPPK RPDEDWGYNQ ENRQRSETYG
301: EDSRDEAGEA SSDYSGAKAR NQRGATPGRT NFMQTPNRGP QTPQGGMKGN RPARGGRGRG GGRDNQQGAI QLPIMGPPFA NLGMPPPSPI HSLTPGMSPI
401: PGAPVFMPPF PPALVWPGAR GVDGNMLPVN PVLSPLPPGP SGPRFPSIGT PPNPNMFFNP PGSERGGGPP NFSGSTFNVP GPMGRGMPSS DKNAGGWVPP
501: PRGGGPPGKA PSRGEQNDYS QNFVDTGMRP QNFIRELELT NVEDYPKLRE LIQKKDEIVS NSASAPMYLK GDLHELELSP ELFGTKFDVI LVDPPWEEYV
601: HRAPGVSDTM EYWSFEDIIN LKIEAIADTP SFVFLWVGDG VGLEQGRQCL KKWGFRRCED ICWVKTNKSS AAPTLRHDSR TVFQRSKEHC LMGIKGTVRR
701: STDGHIIHAN IDTDVIIAEE PPYGSTQKPE DMYRIIEHFA LGRRRLELFG EDHNIRAGWL TVGKGLSSSN FESQSFVRNF ADKDGKVWQG GGGRNPPPDA
801: PHLVVTTPDI ESLRPKSPMK NQQQQSYTPS LASSANNSNR RTTGNSPQAN PNVVVLHQEA SGSNFSVPPP HWAPSPATAP PPMESFRVPE GANNNPRPPE
901: DKTFDMYGFN
001: MKKKQEESSL EKLSTWYQDG EQDGGDRSEK RRMSLKASDF ESSSRSGGSK SKEDNKSVVD VEHQDRDSKR ERDGRERTHG SSSDSSKRKR WDEAGGLVND
101: GDHKSSKLSD SRHDSGGERV SVSNEHGESR RDLKSDRSLK TSSRDEKSKS RGVKDDDRGS PLKKTSGKDG SEVVREVGRS NRSKTPDADY EKEKYSRKDE
201: RSRGRDDGWS DRDRDQEGLK DNWKRRHSSS GDKDQKDGDL LYDRGREREF PRQGRERSEG ERSHGRLGGR KDGNRGEAVK ALSSGGVSNE NYDVIEIQTK
301: PHDYVRGESG PNFARMTESG QQPPKKPSNN EEEWAHNQEG RQRSETFGFG SYGEDSRDEA GEASSDYSGA KARNQRGSTP GRTNFVQTPN RGYQTPQGTR
401: GNRPLRGGKG RPAGGRENQQ GAIPMPIMGS PFANLGMPPP SPIHSLTPGM SPIPGTSVTP VFMPPFAPTL IWPGARGVDG NMLPVPPVLS PLPPGPSGPR
501: FPSIGTPPNP NMFFTPPGSD RGGPPNFPGS NISGQMGRGM PSDKTSGGWV PPRGGGPPGK APSRGEQNDY SQNFVDTGMR PQNFIRELEL TNVEDYPKLR
601: ELIQKKDEIV SNSASAPMYL KGDLHEVELS PELFGTKFDV ILVDPPWEEY VHRAPGVSDS MEYWTFEDII NLKIEAIADT PSFLFLWVGD GVGLEQGRQC
701: LKKWGFRRCE DICWVKTNKS NAAPTLRHDS RTVFQRSKEH CLMGIKGTVR RSTDGHIIHA NIDTDVIIAE EPPYGSTQKP EDMYRIIEHF ALGRRRLELF
801: GEDHNIRAGW LTVGKGLSSS NFEPQAYVRN FADKEGKVWL GGGGRNPPPD APHLVVTTPD IESLRPKSPM KNQQQQSYPS SLASANSSNR RTTGNSPQAN
901: PNVVVLHQEA SGSNFSVPTT PHWVPPTAPA AAGPPPMDSF RVPEGGNNTR PPDDKSFDMY GFN
101: GDHKSSKLSD SRHDSGGERV SVSNEHGESR RDLKSDRSLK TSSRDEKSKS RGVKDDDRGS PLKKTSGKDG SEVVREVGRS NRSKTPDADY EKEKYSRKDE
201: RSRGRDDGWS DRDRDQEGLK DNWKRRHSSS GDKDQKDGDL LYDRGREREF PRQGRERSEG ERSHGRLGGR KDGNRGEAVK ALSSGGVSNE NYDVIEIQTK
301: PHDYVRGESG PNFARMTESG QQPPKKPSNN EEEWAHNQEG RQRSETFGFG SYGEDSRDEA GEASSDYSGA KARNQRGSTP GRTNFVQTPN RGYQTPQGTR
401: GNRPLRGGKG RPAGGRENQQ GAIPMPIMGS PFANLGMPPP SPIHSLTPGM SPIPGTSVTP VFMPPFAPTL IWPGARGVDG NMLPVPPVLS PLPPGPSGPR
501: FPSIGTPPNP NMFFTPPGSD RGGPPNFPGS NISGQMGRGM PSDKTSGGWV PPRGGGPPGK APSRGEQNDY SQNFVDTGMR PQNFIRELEL TNVEDYPKLR
601: ELIQKKDEIV SNSASAPMYL KGDLHEVELS PELFGTKFDV ILVDPPWEEY VHRAPGVSDS MEYWTFEDII NLKIEAIADT PSFLFLWVGD GVGLEQGRQC
701: LKKWGFRRCE DICWVKTNKS NAAPTLRHDS RTVFQRSKEH CLMGIKGTVR RSTDGHIIHA NIDTDVIIAE EPPYGSTQKP EDMYRIIEHF ALGRRRLELF
801: GEDHNIRAGW LTVGKGLSSS NFEPQAYVRN FADKEGKVWL GGGGRNPPPD APHLVVTTPD IESLRPKSPM KNQQQQSYPS SLASANSSNR RTTGNSPQAN
901: PNVVVLHQEA SGSNFSVPTT PHWVPPTAPA AAGPPPMDSF RVPEGGNNTR PPDDKSFDMY GFN
Arabidopsis Description
EMB1691EMB1691 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.