Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G314000.1 | Wheat | nucleus | 89.71 | 98.88 |
| TraesCS4A01G413300.1 | Wheat | nucleus | 88.24 | 98.11 |
| HORVU4Hr1G079900.1 | Barley | nucleus | 86.31 | 94.55 |
| Os01t0267100-01 | Rice | nucleus | 61.43 | 71.07 |
| EER92855 | Sorghum | nucleus | 60.18 | 66.17 |
| Os03t0147700-01 | Rice | nucleus | 49.77 | 64.99 |
| Zm00001d027671_P001 | Maize | nucleus | 58.94 | 64.48 |
| GSMUA_Achr5P10590_001 | Banana | nucleus | 48.87 | 47.06 |
| CDX99517 | Canola | nucleus | 42.76 | 41.54 |
| CDX86882 | Canola | nucleus | 42.65 | 41.2 |
| Bra037896.1-P | Field mustard | nucleus | 43.44 | 41.2 |
| AT4G09980.1 | Thale cress | nucleus | 41.97 | 38.53 |
| Solyc05g056220.2.1 | Tomato | nucleus | 44.46 | 36.02 |
| PGSC0003DMT400059978 | Potato | nucleus | 44.23 | 35.84 |
| Solyc05g056210.2.1 | Tomato | nucleus | 44.12 | 35.65 |
| PGSC0003DMT400059980 | Potato | nucleus | 44.46 | 35.57 |
| KRG91570 | Soybean | nucleus | 44.0 | 35.43 |
| KRH35254 | Soybean | nucleus | 44.12 | 35.39 |
| VIT_16s0050g00820.t01 | Wine grape | nucleus | 45.7 | 32.98 |
| TraesCS6D01G236200.1 | Wheat | nucleus | 13.69 | 17.24 |
Protein Annotations
| MapMan:16.5.1.1.2 | InterPro:DNA_methylase_N6_adenine_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0032259 |
| GO:GO:0080009 | InterPro:IPR007757 | InterPro:MT-A70-like | PFAM:PF05063 | ScanProsite:PS00092 | PFscan:PS51143 |
| PFscan:PS51592 | PANTHER:PTHR13107 | PANTHER:PTHR13107:SF1 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS4D01G311200 |
| EnsemblPlants:TraesCS4D01G311200.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:477891617..477897021
Molecular Weight (calculated)
98288.3 Da
IEP (calculated)
7.939
GRAVY (calculated)
-0.975
Length
884 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQIRRRKLI QSPEALTEQS SSVPWRRRLA TKALERFRGG RRGRTAGVAA TTATTWNLKV PAKASQLGCN LRKRGSNNCS CLMDGSKSNA EEDDYHVIGD
101: LRSPKIPRRS PDGSKDRDFD RRERDDRKGW DSSRSETSAD RVDTRDGGYS SDHNKHGRET EMIHDHADES VGIRKGVDSS SSRGGRSDED INERRGSAMA
201: ENINEDSRSV DQSHQKEEIL GHTVEYGHES KGGVEKVETS PRVGNDGWES SGDRRNRDAP PSQIPDTPDR GKDSSWNVKT QEIEGSEQYS RSRQLRDPKE
301: ANVSEWRSTQ ERLDGSSFHG RAGYRQDSRG RSESFRGSST YGNRYDRSDS IEIRPNSNFD FGREGSVSGR RSDVGAPGTT DDSSTNHPEA DQSGGTSMVS
401: PFTQQGPKGD RSSRGRGRPN GRDSQRIGVP VPLMPPPSFG ALTLPPGQMQ HMGPNIPHSP GPPLLPGVFM PPFPGPMVWP GAGGVDVNML SVPPNLHIPP
501: PVAGEHRFTP SMGAGPIHNV HLNQMGPGMG TPTNMSGLGF NQMSTQNREM THDKPSGGWV PHRHGAPIRK APSRGEQNDY SQNFVDTGMR PQNFIRELDL
601: TSVAEDYPKL RELIQRKDEI VTNAASPPMY FKCDLRQHVL SPEFFGTKFD VILVDPPWEE YVHRAPGITD HIEYWNAEEI MNLKIEAIAD TPSFLFLWVG
701: DGVGLEQGRQ CLKKWGFRRC EDVCWVKTNK KNASSGLRHD SRTLLQHSKE HCLMGIKGTV RRSTDGHVIH ANIDTDIIIA EEPTDGSTKK PDDMYRIIEH
801: FALGKRRLEL FGEDHNIRPG WLTLGKDLSY SNFNKEAYNK NFADSDGKVW QGGGGRNPPP GAPHLIVTTP EIEGLRPKSP PPKN
101: LRSPKIPRRS PDGSKDRDFD RRERDDRKGW DSSRSETSAD RVDTRDGGYS SDHNKHGRET EMIHDHADES VGIRKGVDSS SSRGGRSDED INERRGSAMA
201: ENINEDSRSV DQSHQKEEIL GHTVEYGHES KGGVEKVETS PRVGNDGWES SGDRRNRDAP PSQIPDTPDR GKDSSWNVKT QEIEGSEQYS RSRQLRDPKE
301: ANVSEWRSTQ ERLDGSSFHG RAGYRQDSRG RSESFRGSST YGNRYDRSDS IEIRPNSNFD FGREGSVSGR RSDVGAPGTT DDSSTNHPEA DQSGGTSMVS
401: PFTQQGPKGD RSSRGRGRPN GRDSQRIGVP VPLMPPPSFG ALTLPPGQMQ HMGPNIPHSP GPPLLPGVFM PPFPGPMVWP GAGGVDVNML SVPPNLHIPP
501: PVAGEHRFTP SMGAGPIHNV HLNQMGPGMG TPTNMSGLGF NQMSTQNREM THDKPSGGWV PHRHGAPIRK APSRGEQNDY SQNFVDTGMR PQNFIRELDL
601: TSVAEDYPKL RELIQRKDEI VTNAASPPMY FKCDLRQHVL SPEFFGTKFD VILVDPPWEE YVHRAPGITD HIEYWNAEEI MNLKIEAIAD TPSFLFLWVG
701: DGVGLEQGRQ CLKKWGFRRC EDVCWVKTNK KNASSGLRHD SRTLLQHSKE HCLMGIKGTV RRSTDGHVIH ANIDTDIIIA EEPTDGSTKK PDDMYRIIEH
801: FALGKRRLEL FGEDHNIRPG WLTLGKDLSY SNFNKEAYNK NFADSDGKVW QGGGGRNPPP GAPHLIVTTP EIEGLRPKSP PPKN
001: MKKKQEESSL EKLSTWYQDG EQDGGDRSEK RRMSLKASDF ESSSRSGGSK SKEDNKSVVD VEHQDRDSKR ERDGRERTHG SSSDSSKRKR WDEAGGLVND
101: GDHKSSKLSD SRHDSGGERV SVSNEHGESR RDLKSDRSLK TSSRDEKSKS RGVKDDDRGS PLKKTSGKDG SEVVREVGRS NRSKTPDADY EKEKYSRKDE
201: RSRGRDDGWS DRDRDQEGLK DNWKRRHSSS GDKDQKDGDL LYDRGREREF PRQGRERSEG ERSHGRLGGR KDGNRGEAVK ALSSGGVSNE NYDVIEIQTK
301: PHDYVRGESG PNFARMTESG QQPPKKPSNN EEEWAHNQEG RQRSETFGFG SYGEDSRDEA GEASSDYSGA KARNQRGSTP GRTNFVQTPN RGYQTPQGTR
401: GNRPLRGGKG RPAGGRENQQ GAIPMPIMGS PFANLGMPPP SPIHSLTPGM SPIPGTSVTP VFMPPFAPTL IWPGARGVDG NMLPVPPVLS PLPPGPSGPR
501: FPSIGTPPNP NMFFTPPGSD RGGPPNFPGS NISGQMGRGM PSDKTSGGWV PPRGGGPPGK APSRGEQNDY SQNFVDTGMR PQNFIRELEL TNVEDYPKLR
601: ELIQKKDEIV SNSASAPMYL KGDLHEVELS PELFGTKFDV ILVDPPWEEY VHRAPGVSDS MEYWTFEDII NLKIEAIADT PSFLFLWVGD GVGLEQGRQC
701: LKKWGFRRCE DICWVKTNKS NAAPTLRHDS RTVFQRSKEH CLMGIKGTVR RSTDGHIIHA NIDTDVIIAE EPPYGSTQKP EDMYRIIEHF ALGRRRLELF
801: GEDHNIRAGW LTVGKGLSSS NFEPQAYVRN FADKEGKVWL GGGGRNPPPD APHLVVTTPD IESLRPKSPM KNQQQQSYPS SLASANSSNR RTTGNSPQAN
901: PNVVVLHQEA SGSNFSVPTT PHWVPPTAPA AAGPPPMDSF RVPEGGNNTR PPDDKSFDMY GFN
101: GDHKSSKLSD SRHDSGGERV SVSNEHGESR RDLKSDRSLK TSSRDEKSKS RGVKDDDRGS PLKKTSGKDG SEVVREVGRS NRSKTPDADY EKEKYSRKDE
201: RSRGRDDGWS DRDRDQEGLK DNWKRRHSSS GDKDQKDGDL LYDRGREREF PRQGRERSEG ERSHGRLGGR KDGNRGEAVK ALSSGGVSNE NYDVIEIQTK
301: PHDYVRGESG PNFARMTESG QQPPKKPSNN EEEWAHNQEG RQRSETFGFG SYGEDSRDEA GEASSDYSGA KARNQRGSTP GRTNFVQTPN RGYQTPQGTR
401: GNRPLRGGKG RPAGGRENQQ GAIPMPIMGS PFANLGMPPP SPIHSLTPGM SPIPGTSVTP VFMPPFAPTL IWPGARGVDG NMLPVPPVLS PLPPGPSGPR
501: FPSIGTPPNP NMFFTPPGSD RGGPPNFPGS NISGQMGRGM PSDKTSGGWV PPRGGGPPGK APSRGEQNDY SQNFVDTGMR PQNFIRELEL TNVEDYPKLR
601: ELIQKKDEIV SNSASAPMYL KGDLHEVELS PELFGTKFDV ILVDPPWEEY VHRAPGVSDS MEYWTFEDII NLKIEAIADT PSFLFLWVGD GVGLEQGRQC
701: LKKWGFRRCE DICWVKTNKS NAAPTLRHDS RTVFQRSKEH CLMGIKGTVR RSTDGHIIHA NIDTDVIIAE EPPYGSTQKP EDMYRIIEHF ALGRRRLELF
801: GEDHNIRAGW LTVGKGLSSS NFEPQAYVRN FADKEGKVWL GGGGRNPPPD APHLVVTTPD IESLRPKSPM KNQQQQSYPS SLASANSSNR RTTGNSPQAN
901: PNVVVLHQEA SGSNFSVPTT PHWVPPTAPA AAGPPPMDSF RVPEGGNNTR PPDDKSFDMY GFN
Arabidopsis Description
EMB1691EMB1691 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.